Gene Smed_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4481 
Symbol 
ID5318346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp964494 
End bp965435 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content59% 
IMG OID640776282 
Producthypothetical protein 
Protein accessionYP_001313214 
Protein GI150376618 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGAA GAACTGCAAA CGGCCTCTAC TGGATGTTCC GCTATATCGA GCGGACGGAA 
AACAGTGCCC GCCTTATCGA TGCAGGATTG CGCATGTCGC TGACCCGCAG CGAGTCGGCC
GAGGACGACT GGGACGGAGT GCTTCAAAGT GCCGGCGTGC GCGGACTCTA TGATCAGGTT
CATGAAGGGC TGACGAGTGG CGACGCCATC GATTTCCTTC TGCGCGACCG CGCCAACCCT
TCAAGCGTCA TTTCCTGCAT CGAGGAGGGC CGCAACAATG CCCGCATGGT CCGCACGGCC
CTGACGCGGG AGACCTGGGA AGCGATCAAC GAATGCTGGA TCGAGATGAA GGGAATCCTC
GCAAGAAGGG CAAGGACCAC CGACATGCCG GAAATAATCG ACACGATCAA GCGGCGAACG
GGGCTGATCC GGGGCGCGTT TCACGGCACG ATGCTCAGGA ACGAGATCTT CAACTTCTCG
CGTATCGGCA CCTTTATCGA GAGGGCGGAC AACACAGCCC GTATTCTCGA CGTCAAATAT
TACGTGCTCC TGCCGGCGAT CTCCGCGGTC GGCTCGTCTA TCGACAACGT CCAATGGGAA
TCGATTCTTC GCTCGGTTTC CGCGCACCGG TCCTATGGCT GGGTCTATGA TGCCGAACTC
AGGCCCGCCA ACATCGCCGA CTTCCTGATC GCGAACGGCC GCATGCCGCG CTCACTCGCC
TATTGCTACG AGAAGATCGT CTCCAACCTC GCCTATCTCG CGCGCGAATA CGGCAAACGG
CACGCCGCGC ACGAGACGGC TGAGCGGACC CTTGGTTTTC TGCGCAGCCA ATCGATCGCC
AACATCATGG ATCGTGGCCT GCACGAGTAT CTCGAGGATT TCATCAGCCA GAACAATCGC
TTGGGTCAGG AAATTTCCGA TGGCTACCGG TTCTACCACT GA
 
Protein sequence
MLGRTANGLY WMFRYIERTE NSARLIDAGL RMSLTRSESA EDDWDGVLQS AGVRGLYDQV 
HEGLTSGDAI DFLLRDRANP SSVISCIEEG RNNARMVRTA LTRETWEAIN ECWIEMKGIL
ARRARTTDMP EIIDTIKRRT GLIRGAFHGT MLRNEIFNFS RIGTFIERAD NTARILDVKY
YVLLPAISAV GSSIDNVQWE SILRSVSAHR SYGWVYDAEL RPANIADFLI ANGRMPRSLA
YCYEKIVSNL AYLAREYGKR HAAHETAERT LGFLRSQSIA NIMDRGLHEY LEDFISQNNR
LGQEISDGYR FYH