| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4371 |
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| Symbol | |
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| ID | 5317980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 870738 |
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| End bp | 872747 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776175 |
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| Product | cytochrome o ubiquinol oxidase subunit I |
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| Protein accession | YP_001313108 |
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| Protein GI | 150376512 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCG ATCCAGATCT TCTGAAGCTC ATCTTCGGCC GGCTGACCCT CGACGCCATC
CCCTATCACG AGCCGATCCT CGTCGCGACT TTTGCCGCAG TCGTGCTCGG CGGCATCGCG
CTGACGGGGC TCATCACCTA TTACCGCTTC TGGGGCACGC TCTGGCACGA CTGGCTGACG
AGCGTCGACC ACAAGAAGAT CGGCATCATG TACATCATCC TGGCGCTGGT GATGCTGCTG
CGCGGATTTT CAGACGCGAT CATGATGCGC CTGCAGCAGG CGATGGCCTT CGGCGGTTCG
GAAGGCTACC TGCCGCCGCA TCACTATGAC CAGATCTTCA CCGCACACGG CGTCATCATG
ATCTTCTTCA TGGCGATGCC TTTCGTGACG GGGCTGATGA ACTTCGTCGT GCCGCTGCAG
ATCGGCGCCC GCGACGTTTC CTTCCCCTTT CTCAACAATT TCAGCTTCTG GATGACGGCG
GCCGGCGCGG CCATCATCAT GCTGTCGCTC TTCGTCGGCG AGTTCGCGCG CACCGGCTGG
CTTGCCTATC CGCCGCTCTC GGGCGCGGAC TACAGCCCGG GGGTCGGCGT CGACTATTAC
ATCTGGGGCC TGCAGATAGC CGGCATCGGC ACGACGCTGT CGGGGATTAA CCTGATCGCC
ACGATCGTGA AGATGCGCGC CCCCGGCATG ACGATGATGA AGATGCCGGT CTTCACCTGG
ACGTCGCTCT GCACCAATGT GCTGATCGTC GCGACCTTCC CTGTGCTGAC CGCAACACTG
GCGCTGCTCA CGCTCGACCG CTACGCCGGC ACCAACTTCT TCACCAACGA CCTCGGCGGC
AATCCGATGA TGTATGTCAA CCTCATCTGG ATCTGGGGAC ATCCGGAGGT CTACATTCTC
ATCCTCCCGG CCTTCGGCAT CTTCTCGGAG GTTGTCGCGA CCTTCTGTGG CAAGCGGCTC
TTCGGTTACG CATCGATGGT CTATGCGACG GTGGTGATCA CCATTCTCTC CTACATCGTC
TGGCTGCATC ACTTCTTCAC CATGGGCTCG GGCGCCAGCG TGAACGCCTT CTTCGGCATC
ACCACGATGA TCATCTCGAT CCCGACCGGC GCGAAGATGT TCAACTGGCT CTTCACCATG
TATCGCGGCC GCATCCGCTA CGAGGTGCCG ATGCTGTGGA CGATCGGCTT CATGGTGACC
TTCGTACTCG GCGGCATGAC CGGCGTTCTC CTTGCGGTGC CGCCAGCCGA TTTCGTGCTC
CACAATTCGC TGTTCCTGAT CGCCCATTTC CATAACGTCA TCATCGGCGG CGTGGTCTTC
GGGCTGATGG CCGGCGTCGT CTACTGGTTC CCAAAGGCCT TCGGCTTCAG GCTCGATCCG
TTCTGGGGCA AGATGTCCTT CTGGTTCTGG CTGATAGGCT TCTACTTCGC CTTCATACCG
CTCTACGTGC TGGGCCTCAT GGGGGTTACG CGCCGCGTCA GCCAGTTCGA GGACCCTTCG
CTGCAGATCT GGTTCGTCAT CGCGGCATTC GGCGCCTTCC TGATCGCGCT TGGTATCCTG
TCGATGCTGA TCCAGCTGGT CGTCAGTTTC ATGAATCGCG AGAAGCTGCG CGACATGACC
GGTGACCCCT GGGACGGCCG CACGCTCGAA TGGTCGATTG CCTCGCCGCC GCCGGACTAC
AACTTCGCCT TCACGCCGCT CGTTCACGAT CAGGACTCCT GGTGGGACAT GAAGAAGCGC
GGCTATGAGC GTCCGCTTAC CGGTTTCAAG CCGATCCATA TGCCGAAAAA CACCGGCACC
GGCGTCATCC TCGGGGCAAT CAGCGTCGTC TTCGCCTTTG CCATGGTCTG GTACATGTGG
TGGCTGGCGA TCCTGTCTTT TGTCGCGATG GTGGTGATCG CCATCGGTCA CACCTTCAAC
TACGACCGCG ACTTCTACAT TCCCGCAAAT GTCGTCGCCG ACACGGAGGG CAAGCGCGCC
GAAGAGCTTG CCGCTGAGGT GCAAGCATGA
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| Protein sequence | MFSDPDLLKL IFGRLTLDAI PYHEPILVAT FAAVVLGGIA LTGLITYYRF WGTLWHDWLT
SVDHKKIGIM YIILALVMLL RGFSDAIMMR LQQAMAFGGS EGYLPPHHYD QIFTAHGVIM
IFFMAMPFVT GLMNFVVPLQ IGARDVSFPF LNNFSFWMTA AGAAIIMLSL FVGEFARTGW
LAYPPLSGAD YSPGVGVDYY IWGLQIAGIG TTLSGINLIA TIVKMRAPGM TMMKMPVFTW
TSLCTNVLIV ATFPVLTATL ALLTLDRYAG TNFFTNDLGG NPMMYVNLIW IWGHPEVYIL
ILPAFGIFSE VVATFCGKRL FGYASMVYAT VVITILSYIV WLHHFFTMGS GASVNAFFGI
TTMIISIPTG AKMFNWLFTM YRGRIRYEVP MLWTIGFMVT FVLGGMTGVL LAVPPADFVL
HNSLFLIAHF HNVIIGGVVF GLMAGVVYWF PKAFGFRLDP FWGKMSFWFW LIGFYFAFIP
LYVLGLMGVT RRVSQFEDPS LQIWFVIAAF GAFLIALGIL SMLIQLVVSF MNREKLRDMT
GDPWDGRTLE WSIASPPPDY NFAFTPLVHD QDSWWDMKKR GYERPLTGFK PIHMPKNTGT
GVILGAISVV FAFAMVWYMW WLAILSFVAM VVIAIGHTFN YDRDFYIPAN VVADTEGKRA
EELAAEVQA
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