Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4366 |
Symbol | |
ID | 5318389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 867490 |
End bp | 868068 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776170 |
Product | hypothetical protein |
Protein accession | YP_001313103 |
Protein GI | 150376507 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5664] Predicted secreted Zn-dependent protease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTTCTG TTGGCCTGCC TAACCGTCAT GCCGGCGACA GCACTGGCGG AGTGGCAGGC AGTCGAGAAG ATCGAGACTA TTCCATCACC GGACAATCCG GGCCGGAACT CTACGCCGCG ATCGGCGAAC GGGGACCGCG GGTGGGGGGC CTCGGGCGCG CGATCGCTCA TACGAGCTTC AAGCTCACCT GGAGGCGGAA ATACGAGGAG CGAGACGGCG CCTGTGTCCT CGCCTCCGCG CTGCCGAAGC TGACCATCAC CTACACGCTG CCGAAGCTTT CCGGCAAGCT GTCGGGCAAT ACCGAAGCGA ACTGGGAAAC TTTCATCGAC GGCGTGAAAA GGCATGAACG GGTGCACGGC GATTTCATCA AGGAGATGGT GAGTGCGATC GAGGTCGCGA CCGTGGGCCT CACTGTCGCC GACGATCCCA AGTGCCGCAA GATCAAATCC GAAATGACCA AGCGGCTCGG GGAACTCTCG CGCGCGCAAC GGCAGAAAAG CCGCGACTTC GACAAGGCCG AACTCAGCGA CGGTGGCAAC ATTCACCAAC TGATCCTCAA TCTCGTCAAC GGCGGCTGA
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Protein sequence | MFSVGLPNRH AGDSTGGVAG SREDRDYSIT GQSGPELYAA IGERGPRVGG LGRAIAHTSF KLTWRRKYEE RDGACVLASA LPKLTITYTL PKLSGKLSGN TEANWETFID GVKRHERVHG DFIKEMVSAI EVATVGLTVA DDPKCRKIKS EMTKRLGELS RAQRQKSRDF DKAELSDGGN IHQLILNLVN GG
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