Gene Smed_4366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4366 
Symbol 
ID5318389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp867490 
End bp868068 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content61% 
IMG OID640776170 
Producthypothetical protein 
Protein accessionYP_001313103 
Protein GI150376507 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5664] Predicted secreted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTCTG TTGGCCTGCC TAACCGTCAT GCCGGCGACA GCACTGGCGG AGTGGCAGGC 
AGTCGAGAAG ATCGAGACTA TTCCATCACC GGACAATCCG GGCCGGAACT CTACGCCGCG
ATCGGCGAAC GGGGACCGCG GGTGGGGGGC CTCGGGCGCG CGATCGCTCA TACGAGCTTC
AAGCTCACCT GGAGGCGGAA ATACGAGGAG CGAGACGGCG CCTGTGTCCT CGCCTCCGCG
CTGCCGAAGC TGACCATCAC CTACACGCTG CCGAAGCTTT CCGGCAAGCT GTCGGGCAAT
ACCGAAGCGA ACTGGGAAAC TTTCATCGAC GGCGTGAAAA GGCATGAACG GGTGCACGGC
GATTTCATCA AGGAGATGGT GAGTGCGATC GAGGTCGCGA CCGTGGGCCT CACTGTCGCC
GACGATCCCA AGTGCCGCAA GATCAAATCC GAAATGACCA AGCGGCTCGG GGAACTCTCG
CGCGCGCAAC GGCAGAAAAG CCGCGACTTC GACAAGGCCG AACTCAGCGA CGGTGGCAAC
ATTCACCAAC TGATCCTCAA TCTCGTCAAC GGCGGCTGA
 
Protein sequence
MFSVGLPNRH AGDSTGGVAG SREDRDYSIT GQSGPELYAA IGERGPRVGG LGRAIAHTSF 
KLTWRRKYEE RDGACVLASA LPKLTITYTL PKLSGKLSGN TEANWETFID GVKRHERVHG
DFIKEMVSAI EVATVGLTVA DDPKCRKIKS EMTKRLGELS RAQRQKSRDF DKAELSDGGN
IHQLILNLVN GG