Gene Smed_4295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4295 
Symbol 
ID5318458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp788446 
End bp789141 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID640776100 
Producthypothetical protein 
Protein accessionYP_001313033 
Protein GI150376437 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.440557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.493242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGACG AACTCCTGTC CCTGCTGCTC ATGGTCGACA CGCCCACCGT CTGCAACGCG 
ATCGAGGTGG CGCAGGGCAA GCGCGGCTTC GACGGTTTTA CCCGCGGCAC GGTCGTCAGC
TCGGCACCAA CGGCCCGTCC GGTCGTTGGC TATGCCCGTA CTGCGAAGAT CGCCGCCGCC
GCTCCCTCGA CCGAAGGACC AGCGGTCATC AAGGCGCGGC GAATGGATTA TTACCGCCAC
GTGGCGAGCG GCGCTCCGCC TTCCGTCGCG GTCGTCGAGG ACATGGATTA TCCCCATTGC
GTCGGCGCCT TCTGGGGCGA GATCAACGCG ACCGTCCATC GCGGATTGGG CCTTTGCGGC
GTGATGACCA ATGGCGTCAT GCGCGACCTC GGTGATGTGC CCGAAGACTT CCCGATGATC
GCAGGATCAG TCGGCCCGAG CCATGCCTTC GTGCATGTGA AGGCGATCGG CGTTCCCGTC
TCCGTGTTCG GCCTGACGGT TGCGCCGGGT GACCTCGTCC ATGCGGACCG GCATGGCGCT
GTCGTGGTGC CCCCGGACAT CATTCCCGTC CTTGCAGCCG CGATCGAGAA GCTGCGCGCC
ACCGAGCGGC TGATCCTTGA GCCAGCTCGA CAGCAAGGCT TCGATCTCGC AAAATTCGAG
GAAGCCTGGG CCCGCTTCGA GGCCGCCCGG ACCTGA
 
Protein sequence
MDDELLSLLL MVDTPTVCNA IEVAQGKRGF DGFTRGTVVS SAPTARPVVG YARTAKIAAA 
APSTEGPAVI KARRMDYYRH VASGAPPSVA VVEDMDYPHC VGAFWGEINA TVHRGLGLCG
VMTNGVMRDL GDVPEDFPMI AGSVGPSHAF VHVKAIGVPV SVFGLTVAPG DLVHADRHGA
VVVPPDIIPV LAAAIEKLRA TERLILEPAR QQGFDLAKFE EAWARFEAAR T