Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4229 |
Symbol | |
ID | 5318273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 712837 |
End bp | 713451 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776034 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001312967 |
Protein GI | 150376371 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | [TIGR03308] phosphonate metabolim protein, transferase hexapeptide repeat family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA AACTCGGCCT CGAACCCTGC ATCCATCCGA CTGCGAGCGT CGTGAATTCG ACGCTTGGCC GCTTCACCGA AATCCGGGAA CGCTCGCGAC TCGACGAGGT CGAGTTCGCA GACTACTCCT ACATCATGCA GGACGGCTCG ATCTGGTGCG CGACGGTCGG CAAATTCGTC AACATCGCCG CCGCCGTGCG CATCAACGCC ACCAACCACC CGACCTGGCG AGCGACGCTG CATCATTTCA CCTATCGCGC GCCGATGTAC TGGGAGGATG CGGAGCCCGA TCACGATCTG TTCGCCTGGC GGCGGCAGAA CCGGGTGACA ATCGGCCATG ACGTCTGGAT CGGCCACGGA GCGACCATTC TGCCGGGAGT GAAGGTCGGC AATGGAGCCG TGATCGGCGC CGGCGCCGTC GTCTCCAAGG ACGTGGCGCC CTACACGATC GTCGGCGGGG TCCCGGCGAA ACTCATCCGC GACCGCTTCA CGGCCAGAGT CGGCGAAGCC ATGGACCGGC TCGCCTGGTG GGATTGGGAC CATGCCAAGC TGCGCCATGC GCTGGACGAT TTCCGGGAGC TGACTGCGGA GGAGTTCTTG GTGCGGTATA GTTAG
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Protein sequence | MSEKLGLEPC IHPTASVVNS TLGRFTEIRE RSRLDEVEFA DYSYIMQDGS IWCATVGKFV NIAAAVRINA TNHPTWRATL HHFTYRAPMY WEDAEPDHDL FAWRRQNRVT IGHDVWIGHG ATILPGVKVG NGAVIGAGAV VSKDVAPYTI VGGVPAKLIR DRFTARVGEA MDRLAWWDWD HAKLRHALDD FRELTAEEFL VRYS
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