| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4228 |
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| Symbol | |
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| ID | 5319302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 711076 |
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| End bp | 712794 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640776033 |
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| Product | dihydroxyacetone kinase |
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| Protein accession | YP_001312966 |
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| Protein GI | 150376370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2376] Dihydroxyacetone kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA TCTTTGACGC TCCGGAGGAT TTCGCGACGA CCGCGCTCGC GGGTTTCGCG
GCGATCTATC AGCGCAACGT CCGCCTGGTG AAGGGCGGCG TCGTGCGCTC GACCAAGGTG
CCGAAGGGCA AGGTCGCCGT CGTCGTCGGC GGCGGCTCGG GGCACTATCC GGCCTTCGCC
GGATATGTCG GTCCGGGGTT GGCCGACGCG GCGGTGGCAG GCGATGTCTT TGCCTCGCCC
TCGACGGCCG CCGTAGCTCG CGTCTGCCGC CATGCCGACC AGGGCGGCGG CGTACTTCTC
GGCTTCGGCA ATTATGCCGG CGACGTTCTA AATTTCGGGG TGGCGGCCGA GCGGCTTCGC
TCCGAAGGCA TCGACGTGCG CATCCTGCCG GTGACGGACG ACGTGGCGAG CGCACCCGTG
GACAGCTCGG CCAAACGCCG CGGGATTGCC GGCGACCTCG TCGTCTTCAA GATCGCCGGC
GCGGCAGCGG AAGCCGGCAA ATCGCTCGAC GAAGTGGAAC GGCTCGCGCG CTACGCCAAT
GATCGCACCT TTTCCTTCGG TGTCGCCTTC GGCGGCTGCA CGCTTCCGGG CGCCGCCGGG
CCGCTCTTCA CGGTCCCTGA TGGCCAGATG GCGCTGGGCC TCGGCATCCA TGGGGAGCCG
GGTGTCAGCG AGGAGCCGAT TGCGACGGCA AGCGATCTCG CAAAGCTCCT CACCGGCAAG
CTTCTCGCCG AACGTCCCGC AGGCGCCAGC AAGGCGGCCG CCGTGCTGAA CGGGCTCGGC
TCGACCAAAT ATGAAGAACT CTTCGTGCTG TGGACGGCGG TCGCAAAAGA ACTGGCGGAG
GCGTGTGTTG AGGTGGTCGA CCCCGAATGC GGGGAATTCG TCACCAGCCT CGACATGCAG
GGCTGCTCGC TCACCCTTCT CTGGCTGAAT GAAGAGCTGG AGGCGCTCTG GCGTGCGCCC
GCGGATGCAC CGGTGCTGCG CAAGGGCGTG ATCATTGCCG CCGAGCCGGC GACCGATGAG
ATCGCGGACG CAGACGGTCC ACAATCTTTC GCGCCCGCTT CGGAAGCCTC GAAGGCAAGC
GGCAAGTGCA TCGCCCGGCT GATCGGCAAT ATAGCCGATG CGCTGAAGGA GGCGGAAGAG
GAACTCGGCC GTATCGACGC TTTTGCGGGA GACGGCGATC ACGGTCAGGG GATGCGCCGC
GGCTCGGCTG CCGCATCCGA CGCAGCACAG ACGGCAGTCG CGGCGGGGGC GGGTGCTGCA
AGCGTTCTGG CTGCCGCGGG CGACGCCTGG GCCGATCGCG CCGGCGGCAC GTCGGGTGCG
ATATGGGGGC TGGCGCTCCG CTCCTGGAGC AATGCATTCA GCGATGAGGA CAAGGCGAGC
GACGCGGCGA CCGTGGAGGG CTCCCGCCTT GCGCTCGAGG GCGTGACGCG CCTTGGCCGC
GCGCGTGTGG GCGACAAGAC GCTGGTTGAC GCGCTGGTGC CCTTCGTCGA GACGCTGGAA
AGGGAATCCG CTGCCGGAAG GCCGCTCGTA GAAGCCTGGA ACGCGGCGGC AACAGCCGCG
CAGGAGGCAG CGGATGCGAC CTCGGCGCTG ACCCCGAAAC TCGGCCGCGC GCGGCCGCTG
GCCGAGAAGA GCATCGGCCA TCCGGACGCC GGCGCAGTTT CGCTGGCGCT GGTGGCACGG
GTTGCAGGCG CGTTTTTGAA GGAAGCTGCG GCCGGTTGA
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| Protein sequence | MTTIFDAPED FATTALAGFA AIYQRNVRLV KGGVVRSTKV PKGKVAVVVG GGSGHYPAFA
GYVGPGLADA AVAGDVFASP STAAVARVCR HADQGGGVLL GFGNYAGDVL NFGVAAERLR
SEGIDVRILP VTDDVASAPV DSSAKRRGIA GDLVVFKIAG AAAEAGKSLD EVERLARYAN
DRTFSFGVAF GGCTLPGAAG PLFTVPDGQM ALGLGIHGEP GVSEEPIATA SDLAKLLTGK
LLAERPAGAS KAAAVLNGLG STKYEELFVL WTAVAKELAE ACVEVVDPEC GEFVTSLDMQ
GCSLTLLWLN EELEALWRAP ADAPVLRKGV IIAAEPATDE IADADGPQSF APASEASKAS
GKCIARLIGN IADALKEAEE ELGRIDAFAG DGDHGQGMRR GSAAASDAAQ TAVAAGAGAA
SVLAAAGDAW ADRAGGTSGA IWGLALRSWS NAFSDEDKAS DAATVEGSRL ALEGVTRLGR
ARVGDKTLVD ALVPFVETLE RESAAGRPLV EAWNAAATAA QEAADATSAL TPKLGRARPL
AEKSIGHPDA GAVSLALVAR VAGAFLKEAA AG
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