Gene Smed_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4202 
Symbol 
ID5319097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp683419 
End bp684591 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID640776007 
Product4-hydroxybenzoate 3-monooxygenase 
Protein accessionYP_001312940 
Protein GI150376344 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR02360] 4-hydroxybenzoate 3-monooxygenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTC AGGTCGTCAT AATCGGCTCC GGACCTTCCG GGCTCCTACT CGGACAACTG 
CTTGCGAGGG CGGGGATAGC AAATGTGATC GTCGATCATG CGAGCAAGGA TCATATCCTC
GGCCGTGTGC GCGCCGGCGT TCTGGAGGAA GGGACGGTCC GGCTGATGGA CGAGGCGGGC
TCAGGCGCCC GCATGCATGC CGAAGGCATT GCGCATGACG GCTTCTCGCT TGCCTTCGAC
GGGCGCGATC ATCGAATCGA CCTCTTCGGG CTCACGGGCG GCAGACGGGT GATGATCTAC
GGTCAGATGG AACTCACCCG CGACCTGATG GATCAGCGGG AAAGGGCCGG CGCCCCCTCG
GTCTACGAGG CGGAAAGTGT CACCCCCCGC GATTTCGAAG GGGATGCGCC CCATGTCGCC
TACCGTAAGA ACGGGATTGC GCACCGCATC GACTGCGACT TCATCGCCGG CTGCGACGGG
TTTCATGGCG TCAGCCGCCG TTCGGTGCCG CAAAATGCCT TTCGCAGCTT CGAAAAGGTC
TACCCATTCG GCTGGCTCGG TATCCTTGCC GACGTACCGC CGGTCGACGA TGAACTGGTC
TATGCCAATC ATCCCCGCGG CTTCGCGCTC TGTTCGATGC GATCTCATAC GCGCAGCCGC
CACTATATTC AGTGCCCGCT CGGCGAGAAG ATCGGCGACT GGAGCGATCA ACGCTTCTGG
GACGAACTGC GCCGCCGCTT GCCGGCCCAT CATGCCGAAC GGGTGGTGAC GGGACCTTCC
TTCGAAAAAT CGATCGCCCC GCTGCGTTCC TTCGTCGCCG AGCCGATGCG CTTCAACCGG
CTGTTTTTGG CGGGTGATGC CGCGCATATC GTTCCGCCCA CCGGCGCCAA GGGCTTAAAC
CTGGCGGCAA GCGACGTGCA CTATCTCTTC GAGGCATTTG TCGAGCACTA TCAGGACCGC
TCGAACGCCG GCATCGACGC CTATTCGGCC CGCGCTCTCG CCCGCGTCTG GAAGGCCGTA
CGCTTCTCCT GGTGGATGAC GACGATACTG CACCGCTTCC CGGAGACGAG CGAGTTCGAC
CAGAAGATCC AGGAGGCCGA ACTCGCCTAT CTCACCCACT CGAGCGCGGC CGCGACCGCG
CTCGCGGAGA ACTATGTCGG CCTGCCTTTC TGA
 
Protein sequence
MRTQVVIIGS GPSGLLLGQL LARAGIANVI VDHASKDHIL GRVRAGVLEE GTVRLMDEAG 
SGARMHAEGI AHDGFSLAFD GRDHRIDLFG LTGGRRVMIY GQMELTRDLM DQRERAGAPS
VYEAESVTPR DFEGDAPHVA YRKNGIAHRI DCDFIAGCDG FHGVSRRSVP QNAFRSFEKV
YPFGWLGILA DVPPVDDELV YANHPRGFAL CSMRSHTRSR HYIQCPLGEK IGDWSDQRFW
DELRRRLPAH HAERVVTGPS FEKSIAPLRS FVAEPMRFNR LFLAGDAAHI VPPTGAKGLN
LAASDVHYLF EAFVEHYQDR SNAGIDAYSA RALARVWKAV RFSWWMTTIL HRFPETSEFD
QKIQEAELAY LTHSSAAATA LAENYVGLPF