Gene Smed_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4195 
Symbol 
ID5318953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp677285 
End bp677602 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID640776000 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001312933 
Protein GI150376337 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0422303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAT CGCGAGCGGC AATTGTCTTG CTGTCGGTGG GAGCGGCCGG CATTGCCGCT 
CCTTCGCAGG CGGAAACCAT TCTCGTGGCG ATCGATCGCC TCGTCTACTC GCCGGCGGAG
GTCGATGCGA GGGTGGGCGA CGAGATCGAG TGGATCAACA AGGATGTGCT CGTGCACACG
GCGACCGTCA AAGGCGGCGC GGAAGTGCTT CTGCCGGCCA AAAAATCCGG CCGGCTGGTG
CTGAAGGAAG CTGGCAGCTT CGATTATACC TGCCGCTACC ATCCCAACAT GAAGGGCCGC
GTCACCGTCC GGCCGTGA
 
Protein sequence
MFASRAAIVL LSVGAAGIAA PSQAETILVA IDRLVYSPAE VDARVGDEIE WINKDVLVHT 
ATVKGGAEVL LPAKKSGRLV LKEAGSFDYT CRYHPNMKGR VTVRP