Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4195 |
Symbol | |
ID | 5318953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 677285 |
End bp | 677602 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776000 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001312933 |
Protein GI | 150376337 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0422303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCAT CGCGAGCGGC AATTGTCTTG CTGTCGGTGG GAGCGGCCGG CATTGCCGCT CCTTCGCAGG CGGAAACCAT TCTCGTGGCG ATCGATCGCC TCGTCTACTC GCCGGCGGAG GTCGATGCGA GGGTGGGCGA CGAGATCGAG TGGATCAACA AGGATGTGCT CGTGCACACG GCGACCGTCA AAGGCGGCGC GGAAGTGCTT CTGCCGGCCA AAAAATCCGG CCGGCTGGTG CTGAAGGAAG CTGGCAGCTT CGATTATACC TGCCGCTACC ATCCCAACAT GAAGGGCCGC GTCACCGTCC GGCCGTGA
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Protein sequence | MFASRAAIVL LSVGAAGIAA PSQAETILVA IDRLVYSPAE VDARVGDEIE WINKDVLVHT ATVKGGAEVL LPAKKSGRLV LKEAGSFDYT CRYHPNMKGR VTVRP
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