Gene Smed_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4193 
Symbol 
ID5318951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp672893 
End bp673987 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID640775998 
Producthypothetical protein 
Protein accessionYP_001312931 
Protein GI150376335 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.939474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.682921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTTTT CTGGGGAGAG AACGGAGCCG CGCGGCTTCT CATTATTGAG GATCTCGTTT 
CAGAAGATGC GTATCACTCC AGTCACGATC GTTCGCATGG CTAAAATAGG GCTCGCATTG
TCGGCCGCGG CATTTCTTTC CGGATGCCTC GCCATGGGGC TCTACGATCT GTCGAAAGCT
CCGCCACAGT TGTCCAAGAA AGTGCTCGCC GAGATGGCGA AAAAGAAAAT GTCCCCGAAC
AGTCCCGTGC TCGTGCGGAT ATTCAAGAAG GAGAGCGAGC TGGAGGTGTG GAAGGCCGAC
GCGAGCGGCA CCTATGCGTT GTTCAAGACC TATCCGATGT GCCGTTGGTC GGGGAAGCTT
GGTCCGAAGA AAAAGGACGG TGACCGGCAG GCGCCGGAAG GCTTCTATCA CGTCTCAGCC
CGGATGCTTA ATCCCAATTC GCAGTATTAC GTCTCCTTCA ATCTCGGTTA TCCGAACAGG
CTCGAATCGG CGCTCGGCTA TACGGGCGAG GCTCTGATGG TTCATGGGGC ATGCTCGTCC
GCTGGCTGTT ATGCCATGAC CGATCGAGGC GTCGGCGAGA TCTACGCCAT CGTGCAAAGG
GCCCTCGCGG CCGGACAGAA GCACTTCCAG GTGCAGGCCT ATCCATTCAG GATGACCACG
GAAAACATGG CCCTTCACAA GGGAGACCCG AGCATGGCTT TCTGGAAGAC GCTGAAGCAA
GGCTATGACG CCTTCGCGTT CAGCCGAAGA CAGCCGAAAG TTTCGGTTTG CGGAGGTCGA
TACGTCTTCA ACACCGAATT TGAGGGCGGC GAACCGCGCG ACCCGCTCGC GGCATGTCCT
TCCGCCATGT CTACGGCTGA TACCGAGCTC CTGGCCAGGA TCGAGGCCGA AGGCCACAGG
GTTGAGACCG CTATTGCCTC TTCCGGAACC ACTCCGATTT TCGCCTATGT CGACGGCGGC
ATGCATCCGA CCTTCCGCAC GATGCTGGAA AAAGTTGGAC CCGACCGGCT CGCCGCGGCA
ATCTCTGCAA CCAAGTATCC CGTCAGCAGG CCGCAAGCGG CGCTCGCGGA TCCATATGCG
GGATCGTCAA ACTGA
 
Protein sequence
MVFSGERTEP RGFSLLRISF QKMRITPVTI VRMAKIGLAL SAAAFLSGCL AMGLYDLSKA 
PPQLSKKVLA EMAKKKMSPN SPVLVRIFKK ESELEVWKAD ASGTYALFKT YPMCRWSGKL
GPKKKDGDRQ APEGFYHVSA RMLNPNSQYY VSFNLGYPNR LESALGYTGE ALMVHGACSS
AGCYAMTDRG VGEIYAIVQR ALAAGQKHFQ VQAYPFRMTT ENMALHKGDP SMAFWKTLKQ
GYDAFAFSRR QPKVSVCGGR YVFNTEFEGG EPRDPLAACP SAMSTADTEL LARIEAEGHR
VETAIASSGT TPIFAYVDGG MHPTFRTMLE KVGPDRLAAA ISATKYPVSR PQAALADPYA
GSSN