Gene Smed_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4192 
Symbol 
ID5318950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp672152 
End bp672814 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content62% 
IMG OID640775997 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001312930 
Protein GI150376334 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.631941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGCG GCTGCTCCAC CAGTTCGGCC AGGAACGCCG AGCCGGCCCC TCCGCTCGTC 
GACAATTCCA TCTATGCGAG CGTCTACGGC CCGAAGCCGG ATGAACTCTT TCCGCTTCCT
GCAATACCGT ATGAAAAGAT CGACCCGCGC TTCTATCGCC AGATGGTCGC CAATCCGACT
GGCGAGCGGC CGGGCGTGCT GGTCGTGGAT ACTGCGAACC ACTTCCTTTA TCTGACCTAC
GAAGCCGGAC AGGCGATGCG CTACGGCGTC GGCCTCGGGC GCCAGGGCTT TGAATGGGCA
GGGCGCGGCG TCATTCAGTA CAAGCGCCAG TGGCCGCGCT GGACGCCGCC CGACGAGATG
GTCGCCCGGC AACCGGAACT GGAGCCCTAC AGCATCGCCA ATGGCGGCAT GGAACCGGGT
CTCACCAATC CGCTGGGTGC CCGGGCGCTC TATATTTTCC AGAATGGTGT GGACACGCTT
TATCGAATTC ACGGTTCACC CGAATGGTGG ACCATCGGGA AATCCGTCTC GTCCGGCTGC
GTGCGCATGA TCAACCAGGA CGTCGTCGAT CTCTACAACC GGGTACAGAA CGGAACGCCG
GTCGTCGTGA CGAACCTGGG GAGCCCGTTA TCTGCCCCGA TCCCTCCCGT GGAAGGCGCA
TAG
 
Protein sequence
MLGGCSTSSA RNAEPAPPLV DNSIYASVYG PKPDELFPLP AIPYEKIDPR FYRQMVANPT 
GERPGVLVVD TANHFLYLTY EAGQAMRYGV GLGRQGFEWA GRGVIQYKRQ WPRWTPPDEM
VARQPELEPY SIANGGMEPG LTNPLGARAL YIFQNGVDTL YRIHGSPEWW TIGKSVSSGC
VRMINQDVVD LYNRVQNGTP VVVTNLGSPL SAPIPPVEGA