| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4186 |
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| Symbol | |
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| ID | 5319352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 665958 |
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| End bp | 667124 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775991 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001312924 |
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| Protein GI | 150376328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.35336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCT CGTTTCTCGT CAAATCTCTC GATCGGACGA TCGCCGTCGC TGTCGCGATC
CTGCTTTTGC TGGCCGTCAT TGTTCCCGCG CTCAATCTCC TGACCGCACC GGACCACCCG
CTTCACGTGC CGACCTATAT GGTCTCGCTC TTCGGCAAAT ACCTGACCTA TGCGCTCCTG
GCGCTGGCGC TCGATCTCGT CTGGGGTTTC TGCGGTATCC TCTCGCTCGG GCACGCTGCC
TTCTTCGCCC TTGGCGGCTA TGCCATGGGC ATGTATCTGA TGCGTCAGAT CGGCGCGCGC
GGCTCCTACG GCAACCCGCT TCTGCCGGAC TTCATGGTGT TCCTCAATTG GAAGGAACTA
CCCTGGTTCT GGTACGGCTT CGACATGTTC TGGTTCGCGG CGCTGATGGT CATCCTGGTG
CCGGGCCTCG TGGCCTTCGT CTTCGGCTGG TTCGCGTTCC GCTCGCGCGT CAACGGCGTC
TATCTTTCGA TCATCACCCA AGCGATGACC TACGCGCTGC TGCTCGCCTT CTTCCGCAAC
GACATGGGCT TCGGCGGCAA TAACGGTCTG ACGGACTTCA AGGACATTCT CGGCTTCAAC
ATACAGGCGG ACGGCACGCG TGCCGCGCTC TTTGCCGCCT CCGCACTGGC GCTCGCCGGT
TCGCTCGTCG TTACCTCGGG AATCGTCGGT TCGAAATTCG GAAAGGTCCT TGTGGCTCTG
CGCGATGCGG AAAGCCGCAC ACGGTTTCTG GGCTATCGAG TCGAGCACAT GAAGCTCTTC
GCCTTCACCG TCTCGGCGAT GATGGCGGGT ATCGCCGGTG CGCTCTACGT GCCGCAGGTA
GGCATCATCA ACCCAGGGGA GTTCGCGCCC GCCAATTCGA TCGAGGTGGT CATATGGACT
GCCGTCGGCG GGCGCGGCAC GCTGATCGGG CCGATCGTCG GCGCAATCCT CGTCAATGGC
GGCAAGAGCA TTTTCACCGC CGCCTTTCCG GAATTCTGGC TTTTCGCGCT TGGCGGGCTC
TTCGTGCTCG TTACCCTGTT CCTGCCGAAG GGCGTGGTCG GGACCGCCCA GCACCATCTC
GCGCGACGTC GCCAAGCCCG CGCTGCGGCC CGGAAGGAAG ATGAACAGAC GGACCTTGAG
GACGCCAAGC CGATGGCTGC GGAGTGA
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| Protein sequence | MITSFLVKSL DRTIAVAVAI LLLLAVIVPA LNLLTAPDHP LHVPTYMVSL FGKYLTYALL
ALALDLVWGF CGILSLGHAA FFALGGYAMG MYLMRQIGAR GSYGNPLLPD FMVFLNWKEL
PWFWYGFDMF WFAALMVILV PGLVAFVFGW FAFRSRVNGV YLSIITQAMT YALLLAFFRN
DMGFGGNNGL TDFKDILGFN IQADGTRAAL FAASALALAG SLVVTSGIVG SKFGKVLVAL
RDAESRTRFL GYRVEHMKLF AFTVSAMMAG IAGALYVPQV GIINPGEFAP ANSIEVVIWT
AVGGRGTLIG PIVGAILVNG GKSIFTAAFP EFWLFALGGL FVLVTLFLPK GVVGTAQHHL
ARRRQARAAA RKEDEQTDLE DAKPMAAE
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