| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4070 |
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| Symbol | |
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| ID | 5317899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 533031 |
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| End bp | 533609 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775877 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001312810 |
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| Protein GI | 150376214 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCTA CCCGACGCTC CCTTCTGACC GCATTTCTCG CCGTGCCCGC GCTGCCCGTT
TGCAATCGAG CCGCGGCTCA GCAACCGACA CTACCGCTCA CGCCCGCTTG CCGCGACGAT
GACGACCTGA CGCCCGCACT TACGGCGGGT CCGTTCTACA AGCCCGATGC GCCGCTCAGG
CACGACCTTT CCGGCGACGC CCCGGACGGC GAACGCATCA CCATCGCCGG CTACGTTCTC
GACGGAAATT GCCGTCCGAT CGCCCGCAGC CTCGTCGAAA TCTGGCATGC GGACGAGACC
GGCGCCTACG ATACGCGCGG CTACAGGCTA CGTGGACACC AGGTGACCGA TGAACGGGGA
CGCTGGTGGT TCAGCACCAT CATTCCGGCA CTCTACCCCG GACGAACCCG CCATTATCAC
TTCCGCGTGC GCCGTCCCGG CGCCCCCGTC CTGACGACGC AGCTCTTCTT TCCCAACGAG
CCCCAGAACG ACGGCGACCG CCTTTATTCT CCTTCGCTGC TGCTCGACCT GCGCGACACG
GAGGACGGCA AATTCGGCCG CTTCGACTTC GTGGTTTGA
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| Protein sequence | MLPTRRSLLT AFLAVPALPV CNRAAAQQPT LPLTPACRDD DDLTPALTAG PFYKPDAPLR
HDLSGDAPDG ERITIAGYVL DGNCRPIARS LVEIWHADET GAYDTRGYRL RGHQVTDERG
RWWFSTIIPA LYPGRTRHYH FRVRRPGAPV LTTQLFFPNE PQNDGDRLYS PSLLLDLRDT
EDGKFGRFDF VV
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