Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4055 |
Symbol | |
ID | 5318878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 514949 |
End bp | 515764 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640775862 |
Product | hypothetical protein |
Protein accession | YP_001312795 |
Protein GI | 150376199 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.851033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAA TGACCCCGCA CAGCCCATCG GAAGGCCCCT CAGAGCCGCT CGCGCTGCCG CAGCTCGTGG ATGAGGAAGC CGAGGCCTTC GTCGCCGAGG CGATCGCGGA GCTGGGCCGG TCGGGAATTC CGTTTCTGAT CGCGGGGACT TTTGCCGTGA GTGCACATAC CGGAATATCG CGGCCGACAA AGGATCTCGA CGTCTTCTGC AAACCCGGTG ACTACATCCG GATCCTCAAT CATTTCAAGG CGCTCGGATA TGCCGTCGAA ATCGAGGACG ACCGATGGCT TGGAAAGGTT TTCAAGGGCA AATCCTTCTT CGACGTGATC TTCTCATCAC CGAACGGAAC CATGATGGTC AGCGACTCCT GGTTCGCCAA TGCTCTGCCG GTGGAGATCG GCCCCTCCAT CTGCCAGGTC GTAGCGCCGA CGGAACTCGT CTGGTCCAAG TCGTTCATTC AGCTTCGCCA CCGCTACGAC GGTGCCGACG TCGCGCATGT GATCCTCAAG GCCTATGACC GGATCGATTG GACAAGATTG CTCGGTTACA TGGAAGCGCA TTGGGAGGTC CTGCTCATTC ACATCCTGAA CTTCCGCTGG ATCTATCCCT CGGAGCGGGA CAAGGTTCCG CTCTGGCTGG TGGACGAGCT TTTGAGCCGG CTGGCGGCAC AAAGAGACCT GCCACTGCCC CAGACGAAGA TCTGCCGCGG CAGGATGTAC TCTCGACCCG ACTATGAAAT CGATGTGAAG GAATGGGGTT TCGCTGACGT CGGAGGCGAC TCCGACCTCA GCGCGGAAAC TGAGGATAAG GACTGA
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Protein sequence | MTSMTPHSPS EGPSEPLALP QLVDEEAEAF VAEAIAELGR SGIPFLIAGT FAVSAHTGIS RPTKDLDVFC KPGDYIRILN HFKALGYAVE IEDDRWLGKV FKGKSFFDVI FSSPNGTMMV SDSWFANALP VEIGPSICQV VAPTELVWSK SFIQLRHRYD GADVAHVILK AYDRIDWTRL LGYMEAHWEV LLIHILNFRW IYPSERDKVP LWLVDELLSR LAAQRDLPLP QTKICRGRMY SRPDYEIDVK EWGFADVGGD SDLSAETEDK D
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