Gene Smed_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4055 
Symbol 
ID5318878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp514949 
End bp515764 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content59% 
IMG OID640775862 
Producthypothetical protein 
Protein accessionYP_001312795 
Protein GI150376199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.851033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAA TGACCCCGCA CAGCCCATCG GAAGGCCCCT CAGAGCCGCT CGCGCTGCCG 
CAGCTCGTGG ATGAGGAAGC CGAGGCCTTC GTCGCCGAGG CGATCGCGGA GCTGGGCCGG
TCGGGAATTC CGTTTCTGAT CGCGGGGACT TTTGCCGTGA GTGCACATAC CGGAATATCG
CGGCCGACAA AGGATCTCGA CGTCTTCTGC AAACCCGGTG ACTACATCCG GATCCTCAAT
CATTTCAAGG CGCTCGGATA TGCCGTCGAA ATCGAGGACG ACCGATGGCT TGGAAAGGTT
TTCAAGGGCA AATCCTTCTT CGACGTGATC TTCTCATCAC CGAACGGAAC CATGATGGTC
AGCGACTCCT GGTTCGCCAA TGCTCTGCCG GTGGAGATCG GCCCCTCCAT CTGCCAGGTC
GTAGCGCCGA CGGAACTCGT CTGGTCCAAG TCGTTCATTC AGCTTCGCCA CCGCTACGAC
GGTGCCGACG TCGCGCATGT GATCCTCAAG GCCTATGACC GGATCGATTG GACAAGATTG
CTCGGTTACA TGGAAGCGCA TTGGGAGGTC CTGCTCATTC ACATCCTGAA CTTCCGCTGG
ATCTATCCCT CGGAGCGGGA CAAGGTTCCG CTCTGGCTGG TGGACGAGCT TTTGAGCCGG
CTGGCGGCAC AAAGAGACCT GCCACTGCCC CAGACGAAGA TCTGCCGCGG CAGGATGTAC
TCTCGACCCG ACTATGAAAT CGATGTGAAG GAATGGGGTT TCGCTGACGT CGGAGGCGAC
TCCGACCTCA GCGCGGAAAC TGAGGATAAG GACTGA
 
Protein sequence
MTSMTPHSPS EGPSEPLALP QLVDEEAEAF VAEAIAELGR SGIPFLIAGT FAVSAHTGIS 
RPTKDLDVFC KPGDYIRILN HFKALGYAVE IEDDRWLGKV FKGKSFFDVI FSSPNGTMMV
SDSWFANALP VEIGPSICQV VAPTELVWSK SFIQLRHRYD GADVAHVILK AYDRIDWTRL
LGYMEAHWEV LLIHILNFRW IYPSERDKVP LWLVDELLSR LAAQRDLPLP QTKICRGRMY
SRPDYEIDVK EWGFADVGGD SDLSAETEDK D