| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3987 |
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| Symbol | |
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| ID | 5317913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 438918 |
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| End bp | 439841 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775795 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312728 |
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| Protein GI | 150376132 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CAACCACCGA CAACGTCATC GCTGCAGAGC CGTCGCTCCT GGTCCGCATG
ATGCGCATGC TGCTGGCGGA TAAGTTCGCG CTCTCAGCGG CTATCTTCCT TCTCGTCATC
CTGGCCATCG CCATCATCGG GCCGAGCTGG CTTGGCGATC TCGCTACGAA GCAAAATCTG
CGCGGCCGGA ATCTGCCGCC CTTCGACTGG ACCCGCACCT GGGTCTGGTG GATGGGCGCC
GACGCGCTCG GCCGACCACT CTTTGCCCGC ATCATCGTTG CCGCCCAGAA CACTTTGATG
GTCGCCGCCG GCGCCGTGAT CCTTTCGTCG GTCATCGGCA CCGTTTTAGG GCTCATAGCC
GGCTTCTCCT CGCCGCGCAC CGGCCAGATC ATCATGCGTC TCGCCGACGT GATCATGTCC
TTCCCCTCAT TGCTGATCGC GGTGATCGTG CTTTATGTCC TGGGCTCCTC GATCCTCAAC
CTGATGCTGG TGCTCGCCAT CACCCGTATA CCGGTCTATC TTCGCACGAC GCGCGCCGAA
GTGCTGGAGA TCCGCGAGCG CATGTTCGTG CAGGCCGCCC GCGTCATGGG CGCCTCCAGC
AAGCGCATTC TCTTCCGACA CATTCTGCCT GTGGTGCTGC CGACGCTGAC GACGCTCGCA
ACCCTCGATT TCGCCTATGT CATGCTGGCG GAAAGCGCTC TGTCCTTCCT CGGCATCGGC
ATCCAGCCGC CGGAAATCAC CTGGGGTCTG ATGATCTCGC AGGGCCGGCA ATATCTCACC
AACGCCTGGT GGCTGTCCTT CTGGCCCGGG CTTGCCATCA TTCTCACCAC CATGTCGCTC
AACCTGCTGT CGAACTGGAT GCGGATCGCG CTCGATCCGG TACAGCGCTG GCGTCTCGAA
ATGAAGGGCG GCAAAAATGG CTGA
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| Protein sequence | MTLATTDNVI AAEPSLLVRM MRMLLADKFA LSAAIFLLVI LAIAIIGPSW LGDLATKQNL
RGRNLPPFDW TRTWVWWMGA DALGRPLFAR IIVAAQNTLM VAAGAVILSS VIGTVLGLIA
GFSSPRTGQI IMRLADVIMS FPSLLIAVIV LYVLGSSILN LMLVLAITRI PVYLRTTRAE
VLEIRERMFV QAARVMGASS KRILFRHILP VVLPTLTTLA TLDFAYVMLA ESALSFLGIG
IQPPEITWGL MISQGRQYLT NAWWLSFWPG LAIILTTMSL NLLSNWMRIA LDPVQRWRLE
MKGGKNG
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