Gene Smed_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3925 
Symbol 
ID5318761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp378252 
End bp378641 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID640775735 
Productribulose-bisphosphate carboxylase 
Protein accessionYP_001312668 
Protein GI150376072 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCA CCCAGGGATG CTTCTCGTTC CTGCCGGACC TGACGGACGA GCAGATAACG 
GCTCAGGTGG AATATTGCCT CGGAAGGGGC TGGGCTATCG GCGTCGAATA CACCGACGAC
CCGCATCCCC GTAACACCTA TTGGGAAATG TGGGGCAATC CGATGTTCGA CCTGAGGGAC
GCAAAAGGCG TGATGATGGA GGTGGAGGAT TGCCGCAAGG CTCATCCCCA GGACTATATC
CGACTGAACG CCTTCGATTC CAGCCGCGGC CTTGAGACGG TGACGATGTC CTTCATCGTC
AACCGTCCCG AGAACGAACC GAGCCTCAGG ATGACCCGAA CGGAGAGCGA CGGCCGCAGC
CAGCACTATA CGTGGGAAAC ACAGCGATAG
 
Protein sequence
MRITQGCFSF LPDLTDEQIT AQVEYCLGRG WAIGVEYTDD PHPRNTYWEM WGNPMFDLRD 
AKGVMMEVED CRKAHPQDYI RLNAFDSSRG LETVTMSFIV NRPENEPSLR MTRTESDGRS
QHYTWETQR