Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3899 |
Symbol | |
ID | 5318212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 354820 |
End bp | 355785 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775709 |
Product | putative nutrient deprivation-induced protein |
Protein accession | YP_001312642 |
Protein GI | 150376046 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.939474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATT CCGCACATAC GCACTCCGCT GCCGAACTGC AGCGCGAGAT TGAGGCCGAT CGCCAGCGAA TTGAAGAAAA ACTCCATGAA ATTCAGGAGC GCATGTCGCC GGGAGAGTTG ATGGATGAGC TGCTCGAATA TGCCAAAACG AGCGGCGGGT CCGAATATCT CAGCAATCTC GGGGTGGCGC TCAAGTCGAA CCCGATCCCG GTTGCCTTGA TGGGCGTCAG CCTGGCTTGG CTGATCGCCA ACCCGGCATC CCGTGCGCCA CGACACGAAG AGCAGGACGA CGATTATCCG CTTGCACCGG TGAGAGGCTC CGTGAGGCGC GTGGGTCCGG TGGAGTCGAG CTTCGGCGAA AGGTACAGCC ACTTCACGGA TGAGAGCGGC AGCCGATTTC GTGCCTTGAC CGACGATGCG GGCCGGCGCG CCGGCCATTT CATCGATCCC GCCGGAAAGG TCTATCGCGG CTTTGCCGAC GCGGCGGGCA AGCAGATCGA AGATATACGG GACGAGACGG GCGCCTTGTT CGATGAGGCA TCCGGCTGGG CGTCCAGGAC ATGGAGACAG GTGAGCGCTG CGGCGGGTCG GATGTCCGCC TCCGTAACAG GAGCCGGCAG ATCTTTCGCC GATAGCATGC AAGGTGCCGG GCGGTCGCTG GAAGAACAGG GTGCGCAGCT GAACGCGGCC ATACTCAGGC ACTTCCGCGA CCAGCCGCTC GTCGGAGGTG CGCTTGCCTT CGCTGCTGGC GCGGCCATAG GCGCCGCATT GCCCCATAGC GAAGCCGAAG ACGCGGCCAT GGGCGGCATG GCGGAAGATA TGCGGTCAAA CATCTCGGCA AGAGCGAATG CCGGCGTCGC GCAAGCGATG GAAGCCGGGC AGGAAATTCT GGACAAGGCC GGCGAAGCGG TCCTGGAAGC CCATGACGCC GCCAAGGACC GGCTGCAGCG GCCAGTTCAA GAGTAA
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Protein sequence | MNDSAHTHSA AELQREIEAD RQRIEEKLHE IQERMSPGEL MDELLEYAKT SGGSEYLSNL GVALKSNPIP VALMGVSLAW LIANPASRAP RHEEQDDDYP LAPVRGSVRR VGPVESSFGE RYSHFTDESG SRFRALTDDA GRRAGHFIDP AGKVYRGFAD AAGKQIEDIR DETGALFDEA SGWASRTWRQ VSAAAGRMSA SVTGAGRSFA DSMQGAGRSL EEQGAQLNAA ILRHFRDQPL VGGALAFAAG AAIGAALPHS EAEDAAMGGM AEDMRSNISA RANAGVAQAM EAGQEILDKA GEAVLEAHDA AKDRLQRPVQ E
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