Gene Smed_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3899 
Symbol 
ID5318212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp354820 
End bp355785 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID640775709 
Productputative nutrient deprivation-induced protein 
Protein accessionYP_001312642 
Protein GI150376046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.939474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT CCGCACATAC GCACTCCGCT GCCGAACTGC AGCGCGAGAT TGAGGCCGAT 
CGCCAGCGAA TTGAAGAAAA ACTCCATGAA ATTCAGGAGC GCATGTCGCC GGGAGAGTTG
ATGGATGAGC TGCTCGAATA TGCCAAAACG AGCGGCGGGT CCGAATATCT CAGCAATCTC
GGGGTGGCGC TCAAGTCGAA CCCGATCCCG GTTGCCTTGA TGGGCGTCAG CCTGGCTTGG
CTGATCGCCA ACCCGGCATC CCGTGCGCCA CGACACGAAG AGCAGGACGA CGATTATCCG
CTTGCACCGG TGAGAGGCTC CGTGAGGCGC GTGGGTCCGG TGGAGTCGAG CTTCGGCGAA
AGGTACAGCC ACTTCACGGA TGAGAGCGGC AGCCGATTTC GTGCCTTGAC CGACGATGCG
GGCCGGCGCG CCGGCCATTT CATCGATCCC GCCGGAAAGG TCTATCGCGG CTTTGCCGAC
GCGGCGGGCA AGCAGATCGA AGATATACGG GACGAGACGG GCGCCTTGTT CGATGAGGCA
TCCGGCTGGG CGTCCAGGAC ATGGAGACAG GTGAGCGCTG CGGCGGGTCG GATGTCCGCC
TCCGTAACAG GAGCCGGCAG ATCTTTCGCC GATAGCATGC AAGGTGCCGG GCGGTCGCTG
GAAGAACAGG GTGCGCAGCT GAACGCGGCC ATACTCAGGC ACTTCCGCGA CCAGCCGCTC
GTCGGAGGTG CGCTTGCCTT CGCTGCTGGC GCGGCCATAG GCGCCGCATT GCCCCATAGC
GAAGCCGAAG ACGCGGCCAT GGGCGGCATG GCGGAAGATA TGCGGTCAAA CATCTCGGCA
AGAGCGAATG CCGGCGTCGC GCAAGCGATG GAAGCCGGGC AGGAAATTCT GGACAAGGCC
GGCGAAGCGG TCCTGGAAGC CCATGACGCC GCCAAGGACC GGCTGCAGCG GCCAGTTCAA
GAGTAA
 
Protein sequence
MNDSAHTHSA AELQREIEAD RQRIEEKLHE IQERMSPGEL MDELLEYAKT SGGSEYLSNL 
GVALKSNPIP VALMGVSLAW LIANPASRAP RHEEQDDDYP LAPVRGSVRR VGPVESSFGE
RYSHFTDESG SRFRALTDDA GRRAGHFIDP AGKVYRGFAD AAGKQIEDIR DETGALFDEA
SGWASRTWRQ VSAAAGRMSA SVTGAGRSFA DSMQGAGRSL EEQGAQLNAA ILRHFRDQPL
VGGALAFAAG AAIGAALPHS EAEDAAMGGM AEDMRSNISA RANAGVAQAM EAGQEILDKA
GEAVLEAHDA AKDRLQRPVQ E