Gene Smed_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3879 
Symbol 
ID5318559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp335156 
End bp336220 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID640775691 
Producthypothetical protein 
Protein accessionYP_001312624 
Protein GI150376028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGAAAC TCGGCGTTTT GACCTTTCAC CGATGTATCA ACTACGGATC GTTCTGGCAG 
ACGCGATGTC TCGTGCATGG CCTTCGGTCG CTTGGCACGG ACCCCGTCAT CCTGGATCAT
CAGTCCACCC GTGTGACACG GGCCGAGTGG CGCTGCGCGA TGCAGCCGCT CCTGCCCGCG
AGAACCGCAC GCCCGGATAT TCCACTCTAC GCTTCGAAGA TCAGAAAGTT TCAAAGCGCG
CTGGCCTCAT TGCCGACCAG CGCGTCCTTC GCGCTTGACG ATCCAGCCGG CGCCGAAGAA
TGCGATATCC TGGTCGTCGG CAGCGACGAG GTCTGGAACT TCCGGCATCC CTGGTACGGC
GGCTGTTCAC TTTTTTATGG GGAAGGTCTC GCCGCTAAGA AGAAAGTTTC CTACGCCGCG
ACCTTTGGAA ATCACCCGGC AGCGAACGGC CTTGAACCCT ACTGGGCCGA ACGGCTGCGG
AACTTCGATG GGATCTCCGT GCGCGACGAG AATTCAAGGG CGATCATCGA AAAGGAAGTG
GGGCGCGAGG CGATACTCGT CCTCGATCCG TGCCTGCAAT TCCCCGAAAC GATTTCCTTT
GGCCCGAATG CTTCCGCTTC GCGTCCCTAT ATGGCCGTCT ACGGCCATTC GTTTCCCTCA
TGGTTCCAGA ACGCGGTACG CCTATGGGCC GGGGCGCGCT CGCTACCGCT GGTCAGCGTA
GGATATCGCA ATGAATGGGC GGACGAACAG TGGCTCGATG CCGGCCCCTA CGAGTTTGCG
GCCTGGATGG CCGGTGCGGA GGCCGTCGCG ACGAATTTCT TTCATGGCTG CGTATTCTCC
CTGCTGAATT CCAAGCCCTT CGTCACGGCT CTCTCCGACT ATCGCTCCAA CAAGATCGCC
GATCTTGCAC GCACGGCCGG CGCCGAACGG CACGTGATGT CGCAGGAGAC GCGACCGGCC
GAATACGAGG CGGTCCTGGC AGAAGGCCTG GATCCGGCCA TCATTCACCG GCTTGCCGAA
CTTCGTCGCC AATCACGGAT CTATCTCACA GATGTCCTCG CCTGA
 
Protein sequence
MAKLGVLTFH RCINYGSFWQ TRCLVHGLRS LGTDPVILDH QSTRVTRAEW RCAMQPLLPA 
RTARPDIPLY ASKIRKFQSA LASLPTSASF ALDDPAGAEE CDILVVGSDE VWNFRHPWYG
GCSLFYGEGL AAKKKVSYAA TFGNHPAANG LEPYWAERLR NFDGISVRDE NSRAIIEKEV
GREAILVLDP CLQFPETISF GPNASASRPY MAVYGHSFPS WFQNAVRLWA GARSLPLVSV
GYRNEWADEQ WLDAGPYEFA AWMAGAEAVA TNFFHGCVFS LLNSKPFVTA LSDYRSNKIA
DLARTAGAER HVMSQETRPA EYEAVLAEGL DPAIIHRLAE LRRQSRIYLT DVLA