| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3849 |
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| Symbol | |
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| ID | 5318724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 307031 |
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| End bp | 307822 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775661 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312594 |
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| Protein GI | 150375998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.942011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCCT ATTTCGCCGA TCTCCCCAAG ACCGCGCTCG GCGCTGCCTA CTGGCTGTTT
GCGGTCTATC TCCTGCTACC TTTGGCGCTG ATGACCGCCA TGAGCTTCAA GGATGCGAGC
TTCATCGCCT TTCCGATCAC GGACTGGACG CTCAACTGGT ATGCCCAGGT GCTTCAGGAC
AAGCAGTTCA TCGAGGCCTC GCTCTATTCG ATCGGGATCG CGCTGGCCAC GACCGCTGCG
GCAACCGTCA TAGGCGTCTG GATTGCGCTT CTGGTCACGA CAGAAGGCAT ATGGGGCAAG
GCGATCATCT TCGCGCTCGC ATGCCTGCCC GCAGTCGTTC CTGGCCTCAT CAACGCCATC
TCCATGCGGA TCTTCATCCG CACCGTTGAC ATCCCGACCG GCACGACGGC GATCATCCTG
TCGCATTCCG TCCACGCGGT GCCTTTCGTG GTCATCATGG TGCTCACGCG ACTGCGGTCC
ATGCCGGCCA ATCTGGTCGA CGCCGCTCGC GACCTCGGTG CCGATCCCTT CGTGGCCTTT
CTCAGGGTCA CGATCCCCTA CCTGATGCCG GCGCTCCTCG GCGGCATGAT CTTCTGTGTG
CTCACCAGCA TAGACGATTT CGTCCGTACC TTCTTTCTCG GCGGCTACAA GCCCACGCTG
CCTATGCTCA TCTTCGCAAA GGTACAGGGC GGCATGTCGC CGGAAATCAA TGCCATGGCA
ACGATCGTGC TGATCGTGAC CGCCGCTGTC GGCCTCTATG CCGAGCGCCT CACCCGCCGT
TCAAGGGACT GA
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| Protein sequence | MRPYFADLPK TALGAAYWLF AVYLLLPLAL MTAMSFKDAS FIAFPITDWT LNWYAQVLQD
KQFIEASLYS IGIALATTAA ATVIGVWIAL LVTTEGIWGK AIIFALACLP AVVPGLINAI
SMRIFIRTVD IPTGTTAIIL SHSVHAVPFV VIMVLTRLRS MPANLVDAAR DLGADPFVAF
LRVTIPYLMP ALLGGMIFCV LTSIDDFVRT FFLGGYKPTL PMLIFAKVQG GMSPEINAMA
TIVLIVTAAV GLYAERLTRR SRD
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