Gene Smed_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3800 
Symbol 
ID5318098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp250406 
End bp250927 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID640775613 
Producthypothetical protein 
Protein accessionYP_001312546 
Protein GI150375950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.472138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGA CCCCAGCGCC CGATCCTATG CTCGCCGCTA CTCTGCGGCA GATGGCAGAC 
ATCGCCTTGC CTCCGCGAGT CTCGATGCTG CCGGCCACCT GGGGCTGGGC GGCACTCTTC
GGATTGGTCG CGATCGTCCT TGCAGCCGTC CTCTGGCACC GACTGCGCCA GTACAAGCGC
AACCGCTATC GCCGCGAGGC GCTCGCCGAG CTTTCGCGGT TCGAGAAGGA AGTCGATCAG
CCGTCGGGAC GCCGGCACGC CATGCAGAGC CTCCCTGCCC TCGTCAAGCG CACGGCCCTT
GCGGCCTGGC AGCGGGAAAC AGTCGCTTCC CTAAGCGGAA AGGAATGGTC CGATTTCCTC
GAGGCTCATG CCGGAAGGGC GAGGATCGAC GGCGAGGCCT ACCGTTTCTT CGCTGAAAGC
GAATACCGCC CGGCGACGCT CGCCGCAATG GACGAAGCCA CTGCGCGCCA GAGGCTCGCG
TCCGCACGCC AATGGATCGA GGGTCACAAT GTACGTCCTT GA
 
Protein sequence
MDPTPAPDPM LAATLRQMAD IALPPRVSML PATWGWAALF GLVAIVLAAV LWHRLRQYKR 
NRYRREALAE LSRFEKEVDQ PSGRRHAMQS LPALVKRTAL AAWQRETVAS LSGKEWSDFL
EAHAGRARID GEAYRFFAES EYRPATLAAM DEATARQRLA SARQWIEGHN VRP