Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3800 |
Symbol | |
ID | 5318098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 250406 |
End bp | 250927 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640775613 |
Product | hypothetical protein |
Protein accession | YP_001312546 |
Protein GI | 150375950 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.472138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCGA CCCCAGCGCC CGATCCTATG CTCGCCGCTA CTCTGCGGCA GATGGCAGAC ATCGCCTTGC CTCCGCGAGT CTCGATGCTG CCGGCCACCT GGGGCTGGGC GGCACTCTTC GGATTGGTCG CGATCGTCCT TGCAGCCGTC CTCTGGCACC GACTGCGCCA GTACAAGCGC AACCGCTATC GCCGCGAGGC GCTCGCCGAG CTTTCGCGGT TCGAGAAGGA AGTCGATCAG CCGTCGGGAC GCCGGCACGC CATGCAGAGC CTCCCTGCCC TCGTCAAGCG CACGGCCCTT GCGGCCTGGC AGCGGGAAAC AGTCGCTTCC CTAAGCGGAA AGGAATGGTC CGATTTCCTC GAGGCTCATG CCGGAAGGGC GAGGATCGAC GGCGAGGCCT ACCGTTTCTT CGCTGAAAGC GAATACCGCC CGGCGACGCT CGCCGCAATG GACGAAGCCA CTGCGCGCCA GAGGCTCGCG TCCGCACGCC AATGGATCGA GGGTCACAAT GTACGTCCTT GA
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Protein sequence | MDPTPAPDPM LAATLRQMAD IALPPRVSML PATWGWAALF GLVAIVLAAV LWHRLRQYKR NRYRREALAE LSRFEKEVDQ PSGRRHAMQS LPALVKRTAL AAWQRETVAS LSGKEWSDFL EAHAGRARID GEAYRFFAES EYRPATLAAM DEATARQRLA SARQWIEGHN VRP
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