Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3727 |
Symbol | |
ID | 5318593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 169930 |
End bp | 171162 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775540 |
Product | hypothetical protein |
Protein accession | YP_001312473 |
Protein GI | 150375877 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.291811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCA ATCATCGGCT CACACGTATT ACCGTCGGCA TCCTGCTGCT GGCGCTTGCA ATCGCCGTCC TGCTGCCCGG ATTGACCGGA TACAGCAGCC TTGACGGTAC GGTGAACGCC CGTTTTGCCG TCATAAACGC ACCCGTCGAC GGTGAGATCG ACAAGGCGCC GCCTCGGATC GGGACTCCGG TGAAAGAGGG TGAAACGCTC GCGACAATCA GCAACGAGCG GGTCAACAGG GCGGTGCTGG CGTCGCTGCG CACGGATCAT CGAACCGCCC TCGAGCGCGT TGCGGCGTTG CGGCGGGAGC GGGACGAACT CGTACGGCTG CGGGACGATC TTGCGGGGCG GCTGGACATT TTCCGGAACG CGACCATCGC CAGTCTGGAG CGTGAGCTCC AGATTCTGCA GAAAAGGGTC GAGGTGTCGC GCGCGCAGGA GGTGGTGGCA AGGGTCGATC TGGACCGGCG GCAGGACCTC GAGTCCAAGG GCATTTTTAC CCGCAAGATG GTGGAATCAG CGGAAGCCGC CGGTGCGGCC GCGGGCGGCG AGCTCGAGAT CAGCAACCTG ACGGTTGAAT TGTTGCAGGA ACGCCTCTCG GCCGTGCGAA AGGGCATATT CATCGTCGGC GACGGCCAGA ACGACGTGCC CTATTCCCGG CAGCGCCAGG ACGAGGTCAT CGTCCGCATC CACGATCTCA ATACGCGGAT CGCGGAGAAC GAGACTCGGG CAAAACAGAC AGACCAACAG ATTGCCGAGG AGGAAAGGCG GGTCCTCAAT CTCGAATCGG CAACGATCCC GTCACCCCTG GACGGTGTCG TGTGGACCAG AAATGTGGTC AGCGGCTCAA ATGTCGTTCT GAACAGCGAA GTGATGCGCA TCCTCGATTG CCGCGATCTG TTCGTGGATA TCCTCGTTCC TGAAGTCGAC TATGACGAAA TCTATCCCGG CCGCGACGCC GAGGTTCGGC TCTTCGGTCG GGGCGATGTC TTCAAGGGCC GGGTCCAGGC AGTCAAGGGC TCGTCCGCCG TCGTCGAGAA AGACTCTCTG GCGGCCAACG AGCCGGAGGC GGATGAGCGG AATGCGCGCA TCCGCGTCAC CCTCGCGCCC TCGGCACTCA ACGCCGATTT CGCGAACTTC TGCCAGGTCG GTCGGACGGC GCAGGTACGG TTCTCAAAAC GCAGCCTTCA TGTGGCGCAG TGGATTCAAA GCTTGTGGTT CAATCTCTTC TAG
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Protein sequence | MILNHRLTRI TVGILLLALA IAVLLPGLTG YSSLDGTVNA RFAVINAPVD GEIDKAPPRI GTPVKEGETL ATISNERVNR AVLASLRTDH RTALERVAAL RRERDELVRL RDDLAGRLDI FRNATIASLE RELQILQKRV EVSRAQEVVA RVDLDRRQDL ESKGIFTRKM VESAEAAGAA AGGELEISNL TVELLQERLS AVRKGIFIVG DGQNDVPYSR QRQDEVIVRI HDLNTRIAEN ETRAKQTDQQ IAEEERRVLN LESATIPSPL DGVVWTRNVV SGSNVVLNSE VMRILDCRDL FVDILVPEVD YDEIYPGRDA EVRLFGRGDV FKGRVQAVKG SSAVVEKDSL AANEPEADER NARIRVTLAP SALNADFANF CQVGRTAQVR FSKRSLHVAQ WIQSLWFNLF
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