| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3727 |
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| Symbol | |
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| ID | 5318593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 169930 |
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| End bp | 171162 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775540 |
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| Product | hypothetical protein |
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| Protein accession | YP_001312473 |
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| Protein GI | 150375877 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.291811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCA ATCATCGGCT CACACGTATT ACCGTCGGCA TCCTGCTGCT GGCGCTTGCA
ATCGCCGTCC TGCTGCCCGG ATTGACCGGA TACAGCAGCC TTGACGGTAC GGTGAACGCC
CGTTTTGCCG TCATAAACGC ACCCGTCGAC GGTGAGATCG ACAAGGCGCC GCCTCGGATC
GGGACTCCGG TGAAAGAGGG TGAAACGCTC GCGACAATCA GCAACGAGCG GGTCAACAGG
GCGGTGCTGG CGTCGCTGCG CACGGATCAT CGAACCGCCC TCGAGCGCGT TGCGGCGTTG
CGGCGGGAGC GGGACGAACT CGTACGGCTG CGGGACGATC TTGCGGGGCG GCTGGACATT
TTCCGGAACG CGACCATCGC CAGTCTGGAG CGTGAGCTCC AGATTCTGCA GAAAAGGGTC
GAGGTGTCGC GCGCGCAGGA GGTGGTGGCA AGGGTCGATC TGGACCGGCG GCAGGACCTC
GAGTCCAAGG GCATTTTTAC CCGCAAGATG GTGGAATCAG CGGAAGCCGC CGGTGCGGCC
GCGGGCGGCG AGCTCGAGAT CAGCAACCTG ACGGTTGAAT TGTTGCAGGA ACGCCTCTCG
GCCGTGCGAA AGGGCATATT CATCGTCGGC GACGGCCAGA ACGACGTGCC CTATTCCCGG
CAGCGCCAGG ACGAGGTCAT CGTCCGCATC CACGATCTCA ATACGCGGAT CGCGGAGAAC
GAGACTCGGG CAAAACAGAC AGACCAACAG ATTGCCGAGG AGGAAAGGCG GGTCCTCAAT
CTCGAATCGG CAACGATCCC GTCACCCCTG GACGGTGTCG TGTGGACCAG AAATGTGGTC
AGCGGCTCAA ATGTCGTTCT GAACAGCGAA GTGATGCGCA TCCTCGATTG CCGCGATCTG
TTCGTGGATA TCCTCGTTCC TGAAGTCGAC TATGACGAAA TCTATCCCGG CCGCGACGCC
GAGGTTCGGC TCTTCGGTCG GGGCGATGTC TTCAAGGGCC GGGTCCAGGC AGTCAAGGGC
TCGTCCGCCG TCGTCGAGAA AGACTCTCTG GCGGCCAACG AGCCGGAGGC GGATGAGCGG
AATGCGCGCA TCCGCGTCAC CCTCGCGCCC TCGGCACTCA ACGCCGATTT CGCGAACTTC
TGCCAGGTCG GTCGGACGGC GCAGGTACGG TTCTCAAAAC GCAGCCTTCA TGTGGCGCAG
TGGATTCAAA GCTTGTGGTT CAATCTCTTC TAG
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| Protein sequence | MILNHRLTRI TVGILLLALA IAVLLPGLTG YSSLDGTVNA RFAVINAPVD GEIDKAPPRI
GTPVKEGETL ATISNERVNR AVLASLRTDH RTALERVAAL RRERDELVRL RDDLAGRLDI
FRNATIASLE RELQILQKRV EVSRAQEVVA RVDLDRRQDL ESKGIFTRKM VESAEAAGAA
AGGELEISNL TVELLQERLS AVRKGIFIVG DGQNDVPYSR QRQDEVIVRI HDLNTRIAEN
ETRAKQTDQQ IAEEERRVLN LESATIPSPL DGVVWTRNVV SGSNVVLNSE VMRILDCRDL
FVDILVPEVD YDEIYPGRDA EVRLFGRGDV FKGRVQAVKG SSAVVEKDSL AANEPEADER
NARIRVTLAP SALNADFANF CQVGRTAQVR FSKRSLHVAQ WIQSLWFNLF
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