| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3717 |
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| Symbol | |
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| ID | 5318530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 159609 |
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| End bp | 161738 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775530 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001312463 |
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| Protein GI | 150375867 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.112806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAACC CAATCGTGAT CGGCATCGAC GCGGGCGGTA CGATGACCGA CACCATCCTT
GTCGATCAAA ACGGGCACTT CAAGATCGGC AAGGCCGCCA CCACACCGAA AAACGAGGCG
GAGGGCTTCA TTTCCTCCGC CGCCGATGCC GCGGACGCCT GGGGTATCTC CCTCGATAGT
CTTTTCTCCG GACTCGACGT GGTGCTTTAT TCCGGCACCG GCATGCTCAA CACGCTGCTC
TCGCGCACCG GCCGCAAGCT GGGGCTGATC ACCACCAAGG GCTTGGAGGA CATGGTGCTG
ATGGGCCGCG GACTGCAGGC CTGGGCCGAC TATTCCTATG CCGACCGGCT CCACGCCGTC
ACTCACGCCC ACCCCGATCC GCTGGTGCCG CGCCGCCGCA CCCATGGCGT CACAGAGCGC
GTCGATCATT TCGGAGATAT CGTCCTGCCC CTCTACGAGC ATGAGGTGAC GGCCGCAGCC
CGTGCTCTGA TCCGCGACAA GGTCGATGCC ATCTGCATCA TGACGATCTT CAGCCACGTC
AATCCCGTCC ATGAGAAGCG CATCGCCGAG ATATGCCGGG AGGAGGTTGC CGCCGCCGGT
GCCGAGATCA ACATCTATAC CAGCCATGAG GTTCGCCCGG TCATCCGCGA ACAATCGCGG
CTGAACTCGG TGCTGATCGA AGCTTATGCG ACATCGCGCG GGCGCAAGCA GCTCAGGGGT
ATTCAGGAGG CGTCGCAGAA ATACGGATTC AAGTACGGCG TACAGACATT GCTCTCGTTC
GGAGGCCTGA CGTCGATCAA CCATCCGCGT CTGCATGAGA CGATGATCTC GGGCCCGATC
GGCGGAATTC TCGGCGCGGC CTATATCGGC AAGCTGATCG GAAATGACTC GCTGATCTGT
TCGGATATGG GCGGAACCTC CTTCGACATG GGCGTCATCT CGCGCGGTCA GACCCGCATT
GAAAACGAAC CGCTGATGGA TCGCTTCAAG CTCAATGTGC CGACGCTTCA TCTCGATACG
ATCGGTGCCG GCGCCGGCAT GATTCTCAAG GTCGATCCCC TGACGAGGAA GGTCTCGCTC
GGGCCGGAAA GCGCCGGCGC CGATCCGGGC CCGATCTGTT TTGCCAAAGG CGGCACCGAC
CCGACAATCG CCGACTGCGA TGCGATCCTC GGCCGGTTGA ACCCGCATTA CTTTCTTGGG
GGCAAGGTGG TGCTCGAGGT CGAAAAAGCC CGTGCGGCCT TCAAGGAAAA ATGTGCGGAT
GTGCTCGGTG TCGGTTTGGA AGAAGCAGCG GAGGGCATGA TCGAGATGCT CGAGCAGGAT
GCCAACAATG CGTTGCGGCG CGTCATTTCG GGTCAGGGCA TTCACCCGTC CGAGTTCACG
CTTCTCTCCT ATGGCGGTTC GGGTCCGCTG CATCTTGCCG GCTGCTCGAG AGGCATCGGC
TTCAAGGATA TCATCACGTT TCAGTTCGCT GCCGCCTTCT CCGCCTTCGG CTGCACCACT
GCCGACTATA TGCGCCGGCA TTCGGTCTCG ACCCAGATCG ATATCGGCGC CCATGCCTCC
GACGACAGGC TTGCTGCAGC CGGCGCGCAG GTCACCCAGG TGTGGAAGGA CCTCGAAAAA
GCCGCTGTCG ACGAGATGCT GATCGACGGC CATGCGCGGG AGAAGATCAA GGCCGTTCCC
TTCTTCATGG CCCGTTACAC CGGCCAGCTG GAGGACGTCG AGGTGCTGGC GCCGCTGCCT
TCGATCGACA CTGCGGGCGA CATGCGCGCG GTCCTGGCGC AATTCGAAGA CGTCTACGCC
AAGGCCAATC ACCGCGTCTC GAAATACGGC GAGGCGGGCT TCTCGCTGAT GGAGCTCGGC
GTGATCGCCA CCGCCGAAAA GATCAAGCCG GTGCTCGTCA GGCGGCCTCT CGGGACCGCC
GATCCGCGAT CCGCCCACAA GGGCATGCGC GAAGCCTATA TCGGTGGCCG CTGGCACAAG
GCCGATCTTT ACGAGATGGA TCTGCTCGAG CCCGGACACG AAGTGATCGG TCCCGCGATC
ATCGAACATC CGGCGACGAC GCTGGTGGTG CATCCGAACG ACCGCGTCTT CATCGATGAA
TGGACGCTGC TTCACTACAA CCACGCCTGA
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| Protein sequence | MENPIVIGID AGGTMTDTIL VDQNGHFKIG KAATTPKNEA EGFISSAADA ADAWGISLDS
LFSGLDVVLY SGTGMLNTLL SRTGRKLGLI TTKGLEDMVL MGRGLQAWAD YSYADRLHAV
THAHPDPLVP RRRTHGVTER VDHFGDIVLP LYEHEVTAAA RALIRDKVDA ICIMTIFSHV
NPVHEKRIAE ICREEVAAAG AEINIYTSHE VRPVIREQSR LNSVLIEAYA TSRGRKQLRG
IQEASQKYGF KYGVQTLLSF GGLTSINHPR LHETMISGPI GGILGAAYIG KLIGNDSLIC
SDMGGTSFDM GVISRGQTRI ENEPLMDRFK LNVPTLHLDT IGAGAGMILK VDPLTRKVSL
GPESAGADPG PICFAKGGTD PTIADCDAIL GRLNPHYFLG GKVVLEVEKA RAAFKEKCAD
VLGVGLEEAA EGMIEMLEQD ANNALRRVIS GQGIHPSEFT LLSYGGSGPL HLAGCSRGIG
FKDIITFQFA AAFSAFGCTT ADYMRRHSVS TQIDIGAHAS DDRLAAAGAQ VTQVWKDLEK
AAVDEMLIDG HAREKIKAVP FFMARYTGQL EDVEVLAPLP SIDTAGDMRA VLAQFEDVYA
KANHRVSKYG EAGFSLMELG VIATAEKIKP VLVRRPLGTA DPRSAHKGMR EAYIGGRWHK
ADLYEMDLLE PGHEVIGPAI IEHPATTLVV HPNDRVFIDE WTLLHYNHA
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