| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3675 |
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| Symbol | |
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| ID | 5318782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 114969 |
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| End bp | 115715 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775488 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001312421 |
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| Protein GI | 150375825 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.933884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00557136 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACGG GTGCTTTGGC CGGCAAGGCC GCTTTCGTTA CCGGCGGCAG CAGGGGTATA
GGCGCGGCGA TCGCAAGGAA ACTTGCCCGG GAAGGGGCGT CGGTGGCACT TACCTACGTC
AATTCGGCCG ACCAGGCGCA GGCGGTCGTC TCTGAGATCG AGCTGGCGGG CGGCCGCGCC
ATTGCCATTC GGGCCGATAA CCGCGACGCA GAAAGCATCG AACGCGCCGT TCGCCATGCA
GCCGAGACCC TGGGCCGGCT GGACATATTG GTGAACAGCG CCGGCATCTG GCACTCCGCC
CCTCTGGACG AAACGACCGT CGCCGATTTT GACGAGGTGA TGGCGGTCAA CTTTCGCGCG
CCCTTCGTCG CTATCCGTTC CGCATCAAGA CATCTCGGCG ACGGCGGCAG GATAATCACG
ATCGGCAGCA ATCTGGCGGA ACTGGTTCCA TGGCCCGGGA TCAGCCTCTA TTCGGCCAGC
AAGGCCGCTC TGATCGGCCT GACGAAAGGT CTGGCGCGTG ACCTCGGACC GAGAGGGATC
ACCGTGAACA TTGTTCATCC AGGGTCGACG AACACCGACA TGAACCCGGC CAATGGCGAT
CATGCGGAAG CTCAACGAGA ACGCATCGCC ACCGGCGGCT TCGGTGAGCC GCAAGATATT
GCCGGCTTCG TTGCATGGCT GGCAGGCCCG GATGGAAAAT TCGTCAGTGG GGCATCGTTG
ACGATCGACG GCGGCGCGAA TGCATGA
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| Protein sequence | MTTGALAGKA AFVTGGSRGI GAAIARKLAR EGASVALTYV NSADQAQAVV SEIELAGGRA
IAIRADNRDA ESIERAVRHA AETLGRLDIL VNSAGIWHSA PLDETTVADF DEVMAVNFRA
PFVAIRSASR HLGDGGRIIT IGSNLAELVP WPGISLYSAS KAALIGLTKG LARDLGPRGI
TVNIVHPGST NTDMNPANGD HAEAQRERIA TGGFGEPQDI AGFVAWLAGP DGKFVSGASL
TIDGGANA
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