| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3610 |
|---|
| Symbol | |
|---|
| ID | 5318621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 39434 |
|---|
| End bp | 40963 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640775424 |
|---|
| Product | carbohydrate kinase FGGY |
|---|
| Protein accession | YP_001312357 |
|---|
| Protein GI | 150375761 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGCT ATCTTTTGGG ACTCGATGCC GGCAACACCG TCATCAAAGC GGTGATCTTC
GACCGGGAGG GCAGTGAAAT CGCCTCCGCC GCGGCCGAGG GACACAGCCG GATGCCCTCG
CCGGGCCATG TCGAGCGCGG CCTTGACGAG CTTTGGCAGA ATGCACGCCG CGTTATCCGC
ACATGCATAG ATGAGGCGGA GATCGACGCC GGCGAAATCG GGGCAATCGG CTGCGCCGGC
CATGGCAACG GGCTCTACGC GCTCGATCGG GATGGACGGC CGCTTCTCGC TATCCAATCG
CTCGACACCC GAGCGGCGGC ACTGGTCGAC GAATGGAAGT CGCAAGGTGT CGGGGAACGG
ACCTACCCTA TCGGTCGGCA GCGGCCCTGG CCCTCGCAGA CCCCGACCCT TCTCGCCTGG
TTGAAGCGGC ACCGGCCGGA GGTCTTCGCA AGCCTCGGCA CGGTCTTTCT CTGTAAGGAC
TTCATCGTCA ACCGACTGAC GGGCGCGCGC GTCAGCGACG TTTCAGACAT GACCGGCTGC
GGCTTGCTCA ATCTCGCCGG CCGCCACTAC GACGCGGCGC TCATGGCGGC ATACGGGCTG
TCCGACAGCA TGGACCTTCT GCCGCCGCTT GTGGAAAGCG CCGATATCGC AGGTCGTCTC
ACCGAGGCTG CCGCGGCCGA GACGGGCCTG GCCGCCGGGA CACCGGTGGT CGGCGGCCTT
TTCGACGTGG TTGCCTCGGC GATCGGTTCC GGGGTTACGC GCACGGGCGC CGCTTCCATC
ATCGCGGGGA CGTGGAGCAT CAATCAGGTG ATCATCGAAG GCCCAGAGCT CGATGGACCG
GTATTCATGT CTTCTACGTT CGACCGCGAC CGTTACATGG CGATAGAGTC CAGCGCGACA
TCCGCGGCAA ACCTCGAGTG GCTGGTACGC GAGTTCTTCT CCGACATTCG CTGCGAAGGG
CGCTCTCCGT TCGATCTCTG CTGCGAGCTG GCGTCCTCGA GCGAGCCTGC CTCCGACGAC
CCCCTCTACC ATCCCTTTCT CTACGGCGCC CAACAGGACG GCAGCGCCCG GGCCGGCTTC
TACGGCATCG CCGGCTGGCA CACGAAGGGC CACCTCGTCC GAGCGGTCCT CGAAGGCGTG
GCTTTTGGTC ACCGCCAGCA TATCGAGGCT ATACGGAAAG CGGGCGCCGA CTTCGACGAG
GCGATACTCT CCGGCGGCGG CTCGCGCAGC CTGGTATGGC CGCAAATATT CGCCGACGTG
CTGGGCGTGC CGGTCTCTGT CGCGCGCTCG CGTGAGACGG GCGCCTTGGG TGCGGCAATC
GCGGCGGGCA CTGGCGTCGG CATTTTCTCG GATTTTGCAG AGGGTGCGGC GGCCATGGTG
AAAACCGATC GGCACTATCG CCCGAATACG GCACGCGAAC CGCATTATGC CCGGCGCTAC
GCACTTTACC GAGACATCGC CGATGCCATG GCGCCGCTCT GGCGGCGCCT CTCGGCAATT
GAGGCCACGA CGGCGGGAGC GGCGGCGTGA
|
|---|
| Protein sequence | MGRYLLGLDA GNTVIKAVIF DREGSEIASA AAEGHSRMPS PGHVERGLDE LWQNARRVIR
TCIDEAEIDA GEIGAIGCAG HGNGLYALDR DGRPLLAIQS LDTRAAALVD EWKSQGVGER
TYPIGRQRPW PSQTPTLLAW LKRHRPEVFA SLGTVFLCKD FIVNRLTGAR VSDVSDMTGC
GLLNLAGRHY DAALMAAYGL SDSMDLLPPL VESADIAGRL TEAAAAETGL AAGTPVVGGL
FDVVASAIGS GVTRTGAASI IAGTWSINQV IIEGPELDGP VFMSSTFDRD RYMAIESSAT
SAANLEWLVR EFFSDIRCEG RSPFDLCCEL ASSSEPASDD PLYHPFLYGA QQDGSARAGF
YGIAGWHTKG HLVRAVLEGV AFGHRQHIEA IRKAGADFDE AILSGGGSRS LVWPQIFADV
LGVPVSVARS RETGALGAAI AAGTGVGIFS DFAEGAAAMV KTDRHYRPNT AREPHYARRY
ALYRDIADAM APLWRRLSAI EATTAGAAA
|
|---|
| |