| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3563 |
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| Symbol | |
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| ID | 5324451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3769994 |
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| End bp | 3770848 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792512 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001329213 |
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| Protein GI | 150398746 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.123663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGC CCGAGACGAC CAACGATGTC CCGCAGGATT TCGAGACACT GAAGGCGGTC
ATTCTCGAGC GCAAGGCGCA ACTGCCGAAA CGGCTGAAGC AGGTGGCGGC CTATTCGCTC
GACAATCCGG ACGAGATCGC CTTCGGCACC GCGGCAAGCA TTGCGACTTC GGCCGACGTC
CAGCCCTCGA CTTTGGTGCG TTTCGCCCAG CATTTCGGCT TCGAAGGGTT TTCAAGCCTG
CAGCAGATTT TTCGCGCAAG GTTGCGCGAA CGCACGCCCG GCTACGAGGA GCGGCTGAAG
GCGCTGCGCC AGAACGATCA CAACAATCTC GAGAGCGGAT CGATCTTCAA CGGCTTCGTT
GCGGCTGCTC ATCGCTCGCT TGAAAACATC GCAACGTCGG TCGACCCCCA TTCCTTCGAG
CGCGCCGTCG ATATACTCGC CAAGGCGAAT ACCATCTATC TGATCGCCAA GCGGCGCTCC
TACCCGATCT CCAGCTACAT GGCCTATGCC TTCGGCAAGC TGAAGGTGAA ATATCAGCAT
GTCGGTACGG CTGCCGGGAT CGACGACGAC ATGCTGGCGA TGGCCAACAG GGAAGATGCC
GCCTTCGCGG TGAGTTTCTC GCCTTACGCA AGCGAAAGCG CCAACCAGGC GCGCCTGCTC
GCCAACCGCA AAGTGCCCGT GGTGTCGCTG ACCGACTCCG CCTTCTCGCC GCTCGCCGAA
TCCTCCAAGG TCTGGTTCGA ACTCGTCGAG GCCGATCACG CCGGCTTCCG TTCGCTCTCG
GCCAGCATGG CCTTCGCCAT GGCGCTAACC GTCGCGATTG CCGAGAAACG GCGCCGTATC
GCCGAGGGGG AGTGA
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| Protein sequence | MPMPETTNDV PQDFETLKAV ILERKAQLPK RLKQVAAYSL DNPDEIAFGT AASIATSADV
QPSTLVRFAQ HFGFEGFSSL QQIFRARLRE RTPGYEERLK ALRQNDHNNL ESGSIFNGFV
AAAHRSLENI ATSVDPHSFE RAVDILAKAN TIYLIAKRRS YPISSYMAYA FGKLKVKYQH
VGTAAGIDDD MLAMANREDA AFAVSFSPYA SESANQARLL ANRKVPVVSL TDSAFSPLAE
SSKVWFELVE ADHAGFRSLS ASMAFAMALT VAIAEKRRRI AEGE
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