Gene Smed_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3548 
Symbol 
ID5324436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3754428 
End bp3754802 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content60% 
IMG OID640792498 
ProductSH3 domain-containing protein 
Protein accessionYP_001329199 
Protein GI150398732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CCGTCGTCGA GGATCATGAG GCGAGTTACC CAGATCCGAT CGCGGTCGAG 
GCCGGCCAGG TCATCAGGCC GACCGGGGCA AAGGACAACT GGGATGGATA CGAATGGCTC
TGGGCAGAAG GTCCGGACGG CAAGTCTGGT TGGATTCCGG ACACCATCGT GGAATGCCGC
TATGGAAAAA CATATGCGAT GCGCCGCTAC TCCGCAGTGG AGCTTACCTG CCGAAAGGGA
GAGGTTCTGC TGACTATCGA GGAAATTGAC GGTTGGGCCT GGTGCCGGTC CGATGGCGGC
AGACAGGGCT GGGTGCCTCT GCGCAAGCTT ACATCGCTGG AGGGAGGCGA AGGCGCCCAG
CCGTTTTCAG CTTGA
 
Protein sequence
MKKAVVEDHE ASYPDPIAVE AGQVIRPTGA KDNWDGYEWL WAEGPDGKSG WIPDTIVECR 
YGKTYAMRRY SAVELTCRKG EVLLTIEEID GWAWCRSDGG RQGWVPLRKL TSLEGGEGAQ
PFSA