Gene Smed_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3547 
Symbol 
ID5324435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3752813 
End bp3754411 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content68% 
IMG OID640792497 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001329198 
Protein GI150398731 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATC GGGTTATGCG GAAGGGGCAA TGGTCTTTCG CGCTCAGCTC GAATTCAGGG 
GGCGTCATGG TCGCGCGCGT CAGCACGGTT GCGTTTCAGG GTATCGAGGG CCTTCCGGTC
GACGTCCAGG TGATGGTAGC GCCCGGCAGG GTCGGCATGC AGATCGTCGG GCTGCCGGAT
AAAGCGGTCG CTGAAAGCCG CGAGCGCGTT CAGGCGGCGC TGCATGCATC TGGACTGGCG
CTTCCCGCAA AGCGCGTCAC GGTCAATCTG GCGCCGGCGG ATTTGCCGAA GGAAGGAAGT
CATTTCGATC TCGCCATCGC GCTTGGCCTG ATGGCGGCGC TCGGTGCTGT CCCGGCGGAC
GCGCTGTCCA ATTATATCGT CATTGGCGAG CTCAATCTGG ACGGCACGAT CGCCGCCGTT
GCCGGTGCCT TGCCGGCGGC GATCGGCGCG AATGCGCTCG GCAAGGGGCT GATCTGCCCC
GCCGATAGCG GACCGGAGGC GGCCTGGGCC GGCTCGGAGA TCGACATTCT CGCCCCGCGC
AGCCTGATCG CGATTGCCAA TCACTTCCGC GGCACGCAGG TGCTCTCCCG TCCGGAGCCG
GCGGTGCGGA TGGCGGCCGC AGGCCTTCCC GATCTCTCCG ATATCAAGGG TCAGGAAAGC
GCCAAGCGGG CGCTGGAGGT GGCCGCCGCC GGCAATCATA ATCTCCTGAT GGTCGGCCCG
CCGGGTTCCG GCAAGTCGAT GCTCGCGGCG CGGCTCCCGT CCATTCTGCC GCCGCTTTCG
CCCGCCGAAC TGCTCGAAGT CTCCATGATC CATTCGATTG CCGGACAGCT TCCAGGCGGC
AAGCTCTCCG ACAGCCGGCC GTTTCGCGCG CCGCACCACT CCGCCACCAT GGCGGCGCTC
ATCGGTGGCG GCGCTCGCGC CAAACCGGGC GAGGCATCGC TCGCCCACCA CGGCGTGCTC
TTCCTCGACG AGTTTCCGGA ATTTGCGCCG CAGGTTCTCG ATGCCTTGCG CCAGCCGCTC
GAAACCGCCA CATGCATAAT CGCGCGCGCC AATCACCGCG TCACCTATCC GGCGGCGATC
CAGCTCATCG CAGCCATGAA CCCCTGCCGC TGCGGCATGG CCGGCGAACC GGGGCGCAGC
TGCGCCCGCG GTCCGCGCTG CATGGCCGAC TACCAGGCGC GGATCTCCGG CCCGCTAATG
GATCGCATCG ACATCCGTGT CGACGTCCCG GCGGTCAGCG CCGCCGACCT CATTCGCCCC
GGCACGTCAG AGCCGAGCGC TGCCGTCGCC CGCCGCGTCG CCCGCGCCCG CGAGCTGCAG
AGAGACCGCT TCGCCGTCCT CGGGCATGCC GAGCTCACGA GCAATGCCCG CTCGTCGACG
ACGGTGATCG AAAAAATCGC CGAGCCCGAC GCGGCCGGCC TGCAGCTTCT GAGAGATGCT
GCGGAGAAGA TGAAGTTCTC GGCGCGCGGC TATCACCGGG TGTTGAAGGT GGCTCGCACG
CTTGCCGACC TGGACGAGGC GCCGAGGGTT GGCCGCATTC ATCTGGCCGA GGCGATTTCC
TATCGAATGG CGGGGGAGCG GCTGCCGGTG GCGGCATAG
 
Protein sequence
MPYRVMRKGQ WSFALSSNSG GVMVARVSTV AFQGIEGLPV DVQVMVAPGR VGMQIVGLPD 
KAVAESRERV QAALHASGLA LPAKRVTVNL APADLPKEGS HFDLAIALGL MAALGAVPAD
ALSNYIVIGE LNLDGTIAAV AGALPAAIGA NALGKGLICP ADSGPEAAWA GSEIDILAPR
SLIAIANHFR GTQVLSRPEP AVRMAAAGLP DLSDIKGQES AKRALEVAAA GNHNLLMVGP
PGSGKSMLAA RLPSILPPLS PAELLEVSMI HSIAGQLPGG KLSDSRPFRA PHHSATMAAL
IGGGARAKPG EASLAHHGVL FLDEFPEFAP QVLDALRQPL ETATCIIARA NHRVTYPAAI
QLIAAMNPCR CGMAGEPGRS CARGPRCMAD YQARISGPLM DRIDIRVDVP AVSAADLIRP
GTSEPSAAVA RRVARARELQ RDRFAVLGHA ELTSNARSST TVIEKIAEPD AAGLQLLRDA
AEKMKFSARG YHRVLKVART LADLDEAPRV GRIHLAEAIS YRMAGERLPV AA