Gene Smed_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3529 
Symbol 
ID5324417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3737358 
End bp3738638 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content62% 
IMG OID640792479 
Productputative iron-regulated protein 
Protein accessionYP_001329180 
Protein GI150398713 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3487] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA ATTTCATCCG CACCGCTGCA CTGGCGCTCA TGACGGCGAC ATCGGCGCTG 
GCGTTGCAAC CGGCAAATGC GGCCCCCGAT GCCGCCGCGG TCGTCAAGCA TTACGCAGCC
GTCGCACATG CCAAATACGA GGACGCGCTG ACGACGGCTG AGGCACTGGA CAAGGCCGTC
GATGCGCTGA TCGCAAGCCC GAGCGAAGAA ACGCTGAAGG CCGCGCGCGA GGCCTGGCTC
AAGGCACGCA ACCCTTATCA GGAAACCGAA GTCTACCGTT TCGGCAATAC GATCGTCGAC
GAATGGGAAG GCAAAGTGAA TGCCTGGCCG CTCGACGAGG GCCTCATCGA CTATGTCGAC
GCGAGCTACG GCACCGAAAG CGATGAAAAC GCCCTCTTCA CCGCCAATGT GATCGCCAAC
AAGGTGCTCA AGATCGACGG ACAGGATGTC GATGCGACGA GCATCACGCC GGAGCTCATT
TCCGGCACGC TGCAGGAAGC CGGCGGCATC GAGGCGAATG TCGCGACCGG CTATCATGCG
ATCGAATTCC TGCTCTGGGG ACAGGATCTG AACGGGACTG GTCCCGGCGC CGGCAACCGG
TCCTACACGG ATTTCGACAC CGAGGCCTGC ACCAATGGCA ATTGCGACCG CCGCGCCGCC
TATCTGAAGG CGGCCACCAG CCTGCTCGTC GCCGACCTCA AGGAAATGGT CGCGAACTGG
ACTCCCGACG GCGCAGCCAC CAAGGCTGTC GAGGCGGATC CGAAGGCCGG CCTGGTCGCG
ATCCTGACCG GCATGGGTTC GCTCTCTTAT GGCGAGCTTG CGGGCGAACG CATGAAGCTC
GGCCTGCTTC TCCATGATCC GGAAGAGGAA CACGATTGCT TCTCCGACAA CACCCACAAC
TCGCATCTCC ACGACGCGAT CGGCATCCAG TCGGCCTATA GCGGTGAATA TACCCGCGTC
GACGGCGGCA AGCTTACCGG TCCCTCCCTC TCCGAACTGG TCGGCGCCAA GGACGCGGCC
CTCGACAAGG AGATGAAGGA CAATCTGGGC GCCACGGTCG AAAAGATGCA GGCGATGGCC
AAGCGCGCCG AGACGGTCGA AGCCTACGAC CAGATGATCG GTGAGGGAAA TGCGGAGGGC
AACGCAACGG TTCAGGCCGC AATCGACGGG CTGATCGCCC AGGCCAAGAC GGTCGAACGG
GTCATCGCCG CGCTCGAACT CGGCACCGTC GAGCTTGAAG GTTCCGACAG CCTGGACAAT
CCCGGAGCGG TCTTCCAATA A
 
Protein sequence
MTKNFIRTAA LALMTATSAL ALQPANAAPD AAAVVKHYAA VAHAKYEDAL TTAEALDKAV 
DALIASPSEE TLKAAREAWL KARNPYQETE VYRFGNTIVD EWEGKVNAWP LDEGLIDYVD
ASYGTESDEN ALFTANVIAN KVLKIDGQDV DATSITPELI SGTLQEAGGI EANVATGYHA
IEFLLWGQDL NGTGPGAGNR SYTDFDTEAC TNGNCDRRAA YLKAATSLLV ADLKEMVANW
TPDGAATKAV EADPKAGLVA ILTGMGSLSY GELAGERMKL GLLLHDPEEE HDCFSDNTHN
SHLHDAIGIQ SAYSGEYTRV DGGKLTGPSL SELVGAKDAA LDKEMKDNLG ATVEKMQAMA
KRAETVEAYD QMIGEGNAEG NATVQAAIDG LIAQAKTVER VIAALELGTV ELEGSDSLDN
PGAVFQ