Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3434 |
Symbol | |
ID | 5324320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3639042 |
End bp | 3639653 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792384 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001329087 |
Protein GI | 150398620 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG CATCGCTGCT CGTCTTTGCC GGTGCGCTTT TGATCGCCGC CGGCTCGCCG GGGCCGAGCA TCGCAGCGCT CGTCGCCCGT GTGCTCGCCA AAGGCGCACG TGACGTCTTG CCTTTCCTCG CCGCCATGTG GATCGGCGAG GCGGTCTGGC TCTCCTTCGC GGTTGCCGGC CTCGCGGCGA TCGCCGGGAC GTTCCATTGG GTTTTCGTCG CGATCAAATG GGCCGGTGTC GCCTATCTCC TCTTTCTCGC CTGGAAAATG TGGGCGGCCG AGCCGCAAAT GCCCGGCGAA AATATTCCGG AAACCCGGTC TTCATCGAAG ATGTTCTTCG CCGGGCTGAC GGTCACGCTC GGCAATCCCA AGATCATGAT GTTCTATGTG GCGCTGCTTC CCTCGATCAT CGATCTCGGC TCGGTCGGCC TCTTCGGCTG GGCAGAGTTG GTCGCCACCA TGTTCGCCGT GCTCGTCGTC ATCGATCTGG CCTGGGTGCT GATGGCCGCG AAGGCGCGGC AGTTCCTGAA AAGCCGCCGT GCGGTCCGGA TCGTCAACCG GGCCAGCGCC GGCACGATGG CCGGAGCGGC GGTGGCCATC GCGGTGCGTT GA
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Protein sequence | MSIASLLVFA GALLIAAGSP GPSIAALVAR VLAKGARDVL PFLAAMWIGE AVWLSFAVAG LAAIAGTFHW VFVAIKWAGV AYLLFLAWKM WAAEPQMPGE NIPETRSSSK MFFAGLTVTL GNPKIMMFYV ALLPSIIDLG SVGLFGWAEL VATMFAVLVV IDLAWVLMAA KARQFLKSRR AVRIVNRASA GTMAGAAVAI AVR
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