| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3432 |
|---|
| Symbol | |
|---|
| ID | 5324318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3636635 |
|---|
| End bp | 3638512 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640792382 |
|---|
| Product | DNA polymerase III subunits gamma and tau |
|---|
| Protein accession | YP_001329085 |
|---|
| Protein GI | 150398618 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AAGCGCCCAC TTCAATCCCG ATTTCATCCG TCGAGAAGCC CGCCGCCTAC
CGTGTTCTGG CGCGCAAATA CCGCCCCAAG GACTTCTCCG ATCTGATGGT CGGACAGGAG
CCTATGGTGC GTACGCTCAC CAACGCCTTC GAGACCGGCC GCATCGCTCA GGCCTATATG
CTGACCGGCG TGCGCGGAGT CGGCAAGACG ACGACGGCGC GCATCCTGGC GCGGGCGCTG
AATTACAAGA CCACCGGGAT CGACAAGCCC ACCATCGACC TGAGGCTCCC CGGCGAGCAC
TGCCAGGCGA TCATGGACGG CCGCCATGTC GACGTGATCG AGATGGACGC CGCCTCGCAT
ACCGGCATCG ACGATATCCG CGAGATCATC GAGCAGGTGC GCTACCGGCC GGTATCGGCG
CGCTACAAGG TGTATATCAT CGATGAAGTG CACATGCTCT CGACGCAGGC CTTCAATGGG
CTGCTGAAGA CGCTCGAGGA GCCGCCGGAG CATGTGAAGT TCATTTTCGC GACGACGGAG
ATCCGTAAGG TTCCGATTAC CGTTCTGTCG CGCTGCCAGC GCTTCGATCT GCGGCGGATC
AGCGCTTCCG ATCTGGTCGG TCTCTTTTCC ACCATTCTCG GCAAGGAGGG TGTTCCCTTC
GATCCGGAGG CATTGGCAAT GGTCGCCCGC GCGGCGGAAG GCTCGGCGCG TGACGGCCTG
TCGCTGCTCG ACCAGGCGAT CGCCCATGGT GGCGGCTCGG TCGAGGTTGA AACCGTGCGC
TCGATGCTCG GACTTGCCGA CAGGGCGCGG ATCGTCGATC TTTTCGAGCA CATCATAAAG
GGCGATGTCG CCGCCGCGCT GCACGAATTC GCCGCGCAAT ATGAAGCAGG CGCCAATCCG
ACGGTAGTCC TGACAGACCT TGCCGACTTC ACCCATCTGG TGACACGGCT GAAATATGTG
CCTGATGCGA TCAACGACCA ATCCCTGAGC GAGATCGAGC GTCGGCACGG GGCGGAATTC
GCCGGCAGCG TTGCCGTGAC GACGCTGTCG CGCATCTGGC AGATGCTGCT CAAGGGCATA
CCCGAGGCGG AGAGTTCGGC GCGCCCCGCG GGTGCTGCCG AGATGGTGCT GATCAGGCTT
GCCCATGCGG CCCATCTGCC TTCGCCCGAA GAGGCGGCCC GGCGGCTCCT CGATCTTTCG
GGCAGCGAAG GAGCCGGGCG CCCGTCGCCG AATGGCGGTG GCGGTGGCGG TGGTGCGCAG
GCGTTTGCCG CCGCGTCGGT CGAGGCTCGC GCCGTAGCGA CGGGTGCGTC GCGCGCCAGC
GGCAACGGCG CGACCATGCT GCGCGCGGTG CCGAACTCGG CGGCGCAACC GGTCGAGGTT
GGCCGCATCG AAGAGCGTCC GATTGCAAGC CCGGCTGCGA AGCCCGAACC GAAGGTGCCG
GTCAACTCGG TCGGCGACAT CGCCGATCTC TGCGCGAAGA ACCGGGATAT AAAGCTGAAG
ACGCTGGTGC GTGGTTTCCT GAGGCTCGTG CATATCGAGC CCGGCCGGCT CGACGTCAAC
CTGCCCGACG ATGCGCCGAA GACGCTCTTG AACGAACTCG CCGTCAAGCT CAAGGAGTGG
ACCGGGATCC ATTGGGTCGT GAGCTACAGC CGCGAACAGG GCGAGCCGAC CCTGGCCGAG
GCCGAGCAGC GCGCCCAGGA ACAGCGCGTC AACGATGCGC GCGAAGATCC TGTCGTCGCT
GCCATTCTTG CGCGCTTTCC CGGCGCGAGG ATCACAGATG TTCGCATCCG CGCGGCGGAA
GAGGAGATCG AGAACCTCGC ACCGGCCGCG GCCGAATCCG AGGACGGCGA TATCGTCCCG
GGGGACGATA TCGAATAG
|
|---|
| Protein sequence | MSDEAPTSIP ISSVEKPAAY RVLARKYRPK DFSDLMVGQE PMVRTLTNAF ETGRIAQAYM
LTGVRGVGKT TTARILARAL NYKTTGIDKP TIDLRLPGEH CQAIMDGRHV DVIEMDAASH
TGIDDIREII EQVRYRPVSA RYKVYIIDEV HMLSTQAFNG LLKTLEEPPE HVKFIFATTE
IRKVPITVLS RCQRFDLRRI SASDLVGLFS TILGKEGVPF DPEALAMVAR AAEGSARDGL
SLLDQAIAHG GGSVEVETVR SMLGLADRAR IVDLFEHIIK GDVAAALHEF AAQYEAGANP
TVVLTDLADF THLVTRLKYV PDAINDQSLS EIERRHGAEF AGSVAVTTLS RIWQMLLKGI
PEAESSARPA GAAEMVLIRL AHAAHLPSPE EAARRLLDLS GSEGAGRPSP NGGGGGGGAQ
AFAAASVEAR AVATGASRAS GNGATMLRAV PNSAAQPVEV GRIEERPIAS PAAKPEPKVP
VNSVGDIADL CAKNRDIKLK TLVRGFLRLV HIEPGRLDVN LPDDAPKTLL NELAVKLKEW
TGIHWVVSYS REQGEPTLAE AEQRAQEQRV NDAREDPVVA AILARFPGAR ITDVRIRAAE
EEIENLAPAA AESEDGDIVP GDDIE
|
|---|
| |