| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3424 |
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| Symbol | |
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| ID | 5324309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3629371 |
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| End bp | 3630315 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792373 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001329077 |
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| Protein GI | 150398610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG TCTTCCTGAA CGTTCTACCG ATCTTTGTCC TGATCCTGAC CGGCTGGCTC
ATCGTCCGCC TCGGCTATCT GAAGCCGGCT GTCGGCGAAG CGCTCGGCGA CTTCGTCTTC
CGGGTCGCGG TGCCCGTGCT TCTTTTTCGT ACCATCGCCG AGGCGGATTT CAAGGAAGGG
TCCCCCTGGC CGCTCTGGGT CGCCTACTTC TCCGGCGTCG CGGTGACCTG GGCCATCGGC
CACCTTGCAG CAACGATCGG GTTCGGTCGC GACGCGCGCA TGGGGGTGCT TGCGGGCGTC
TCGTCCGCCT TCGCCAATAC CGTCTTCATT GGACTGCCCC TGGTTTCCCG TCTTGTCGGC
GAAGACGGCA TCGTTGCCCT GTCGATCCTG CTCTCGGTCC ATCTGCCGGT CATGATGATC
GCCGGAACGG TTCTGATGGA GAGAGCGGAT CGCCAGACGA CCGGAACGCC GGGGCAGGGG
ATATGGAAAC TCATGGGCGG TGTTGCGCGC AATCTGGTCC GCAATCCGCT TGTGATAGGC
CTTGCCTGTG GCGCTCTCTT CCACCTTCTC GGGCAGCCGC TCGGCGGGCC GGTGAAGACC
GTCGTCGACC AGCTTGCAGG CGTTGCGGCG CCTGCAGCGC TCGTCTCTAT CGGCATGGCC
CTCGACAAGT ACGGCCTTGC CGGCAACACC GGCCTTGCAA CCGTGACGAG CACGCTCAAG
CTCCTGGTGC TGCCCGGCGC CGTTTTTGCC GCGTGCCACC TGCTGGGCCT GAACGACAGC
TGGACCGCGG CGCTGGTGCT CACCTCCTCA GTCCCGACCG GCGTCAACGC CTGGCTGATC
GCCAACCACT TCAATGTCGG ACACGGGCTC GCCTCCTCGA CCATTACGCT GACGACCGCG
CTCGGCGTGG TCAGCGTGTC GATATGGGCT TATCTCTTGA TGTGA
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| Protein sequence | MSDVFLNVLP IFVLILTGWL IVRLGYLKPA VGEALGDFVF RVAVPVLLFR TIAEADFKEG
SPWPLWVAYF SGVAVTWAIG HLAATIGFGR DARMGVLAGV SSAFANTVFI GLPLVSRLVG
EDGIVALSIL LSVHLPVMMI AGTVLMERAD RQTTGTPGQG IWKLMGGVAR NLVRNPLVIG
LACGALFHLL GQPLGGPVKT VVDQLAGVAA PAALVSIGMA LDKYGLAGNT GLATVTSTLK
LLVLPGAVFA ACHLLGLNDS WTAALVLTSS VPTGVNAWLI ANHFNVGHGL ASSTITLTTA
LGVVSVSIWA YLLM
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