Gene Smed_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3423 
Symbol 
ID5324308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3628907 
End bp3629266 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content58% 
IMG OID640792372 
Producttransport-associated 
Protein accessionYP_001329076 
Protein GI150398609 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT TGCAGAAGAT TTACGGGCAA CAGTGCGACC GGAACATTCC TGTGCTGCCG 
GGCGTTGCGT CCAAGGAGGG AACGCTGGGA ATGCCAAATG AATACCCTAC CTACTCCCAC
AAGGACGACG ATCCTCATCT GACCGATGAC GATCTCGCAG CAAAAGTCCT GCACTTCCTT
CGCTACGCAA CCTCCCTGGA TACGAGCGAT ATGGAGGTGA TCGCCCTGGG CAACATCGTC
GTACTCTCCG GTACCGTCGG AAGCGAAGCG GACATCGCCA CTGCCGGCGA GGCAGCCGCA
TCCGTCATCG GCGTTTCGAG CGTCGAAAAC AGGCTGGTCA TGCGTGAGGG CGAAGACTGA
 
Protein sequence
MQQLQKIYGQ QCDRNIPVLP GVASKEGTLG MPNEYPTYSH KDDDPHLTDD DLAAKVLHFL 
RYATSLDTSD MEVIALGNIV VLSGTVGSEA DIATAGEAAA SVIGVSSVEN RLVMREGED