Gene Smed_3367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3367 
SymbolmepA 
ID5324251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3568690 
End bp3569757 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content65% 
IMG OID640792318 
Productpenicillin-insensitive murein endopeptidase 
Protein accessionYP_001329023 
Protein GI150398556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3770] Murein endopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTG ATGCGCGTGC TGCGCTTAGG CGCTGCGGTT CGGCCGTCCT GGCTCTGATC 
ATGGGGGCAA GCCTCGTCTC CGCGGAGGCG GCTGCGGACG ACGCTCCGCC GGCCAAGGAA
CTCTTCGGCG CCAAAGGCCT GCCGATGCAG GCGGCGCCGG CCGCGTTCGG ATTCTACTCC
AAGGGCTGCC TCGCCGGTGG CGTGGCCATC CCGACCGACG GACCGACATG GCAGGCGATG
CGCCTGTCGC GAAACCGCCG CTGGGGACAT CCGGCGATGA TCGCGCTGAT CGAGCGCTTC
TCCCATGATG CCGTCGACAA GATCGGCTGG CCTGGCCTCT TGCTCGGCGA TATCTCGCAG
CCGCGCGGCG GCCCGATGCT TTCGGGCCAC GCATCGCACC AGATCGGGCT CGATGCCGAC
ATTTGGCTGA CTCCGATGCC GCGAAAGACG CTGAGCTACC AGGAGCGCGA GACGATTTCC
GCGACGTCCA TGCTCGATAA GAGCAAGTTC CTGACGGTCG ATCCCTCCAT CTGGACGCCA
TCGCACGCAC GGCTGATCAT GATGGCAGCC AGCTATCCGC AGGTCGAGCG GGTCTTCGTG
AACCCCGCTA TCAAAAAGAA GCTCTGCGAC ACCTGGAAAG GCGATCGTTC GGCGCTCGGC
AAGGTGCGGC CGATCTATGG CCATGATTAT CACTTCCACA TCAGGATCAA ATGCCCTCCG
GGCTCCAAGG GCTGCAAGGA CCAGGCCGCG GTTCCGGCGG GTGACGGCTG CGGCAAGTCG
CTGGCGTGGT GGTTCACCGA CGAGCCCTGG GCAAAGCCGA AGCAAAAGCC CGCTGCGAAG
CCGCCGCGGC CGAAATTCGC GAAACTCTCC GATCTTCCGA AGGCCTGCGC CCTTGTGCTG
AACGGCCCCG CTCCCTCTTC CGAACAGGAA GCGACCTACG GTACTGCCTA TCGCGCTCCC
GCCGCCATTC CTGCAGCGGC AACCAGCATC GAAGCGGTCA TCGAAGCGGC AGGCGAGGCG
CCGCTCGCGG ATATTCCCGT GCCTTTGCCG CGGCCGGGCT TGGAATAG
 
Protein sequence
MRFDARAALR RCGSAVLALI MGASLVSAEA AADDAPPAKE LFGAKGLPMQ AAPAAFGFYS 
KGCLAGGVAI PTDGPTWQAM RLSRNRRWGH PAMIALIERF SHDAVDKIGW PGLLLGDISQ
PRGGPMLSGH ASHQIGLDAD IWLTPMPRKT LSYQERETIS ATSMLDKSKF LTVDPSIWTP
SHARLIMMAA SYPQVERVFV NPAIKKKLCD TWKGDRSALG KVRPIYGHDY HFHIRIKCPP
GSKGCKDQAA VPAGDGCGKS LAWWFTDEPW AKPKQKPAAK PPRPKFAKLS DLPKACALVL
NGPAPSSEQE ATYGTAYRAP AAIPAAATSI EAVIEAAGEA PLADIPVPLP RPGLE