Gene Smed_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3344 
Symbol 
ID5324228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3544217 
End bp3545191 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID640792295 
Productadenosine deaminase 
Protein accessionYP_001329000 
Protein GI150398533 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCTC ATCTGAAGAA GGCAGAGCTG CACTGCCACA TCGAAGGCGC GACGCCGCCG 
GAACTGGCGG TGAGACAGGC TCGGAAATAC GGCGTCGATA CCGGCACAAT CATCCGGGAC
GGTGCCTATG TCTGGGAGGA TTTCACCAGC TTCGTGAAGT GCTACGATGC CGTGGCTTCG
CTGTTTCGCA CCGAGGGGGA TTATGCGCTT CTCGCCGAGG CCTATCTGAC GGAGCTTGCA
GAAGCCGGCA CGATCTATAG CGAGATCATC GTCTCGCCCG ACCACGGCAA CACGGTCGGC
CTCGGGGCAG ATGCATATCT CGAGGGGCTG GCCGCCGGCA TGGAAGCCGC GAAGGCCAGA
AAGGGGATCG AATCCCGCAT GCTGATCACC GGCATCCGGC ACCTCGGCCC GGAAGCAGTC
GTCAGGACCG CGGAATATGC AGCCTCGCAT CGGCATCCGC TCGTCACCGG TTTCAACCTG
GCCGGCGAGG AGCGCATGCA TAGCGTGGCT GAATTTTCCC GTGCCTTCGA CATCGTCCGC
GATGCCGGTC TCGGCCTGAC CATTCACGCC GGCGAGCTTT CCGGCGCCTT CAGCGTGCGC
GACGCTCTGG ACCACGTCCG CCCCGCCCGG ATCAGTCACG GTGTCCGGGC GATCGAGGAC
ACGGACCTCG TCAGGCGGCT TGCCGATGAG GGCGTGGTGC TCGAAGTCTG CCCCGGCTCG
AATATCGCGT TGAAGGTGTT TCCGGATTTC CCCTCGCATC CGCTGCGGCG GCTTTACGAC
GCCGGCGTCC GCGTGACGCT CAACTCCGAC GATCCCCCCT TCTTCCATAC CTCGCTGGCG
CAGGAATACG AGATCGCCGC CCACGCCATG GGATTCTCCG ACGGCGAGAT CGACCGGATG
ACGAGAACGG CGCTCGAAGC CGCCTTCGTG GACGAGCCGA CGCGAGAGAG GCTGCTGGCT
GCGTTGCACA TCTGA
 
Protein sequence
MTAHLKKAEL HCHIEGATPP ELAVRQARKY GVDTGTIIRD GAYVWEDFTS FVKCYDAVAS 
LFRTEGDYAL LAEAYLTELA EAGTIYSEII VSPDHGNTVG LGADAYLEGL AAGMEAAKAR
KGIESRMLIT GIRHLGPEAV VRTAEYAASH RHPLVTGFNL AGEERMHSVA EFSRAFDIVR
DAGLGLTIHA GELSGAFSVR DALDHVRPAR ISHGVRAIED TDLVRRLADE GVVLEVCPGS
NIALKVFPDF PSHPLRRLYD AGVRVTLNSD DPPFFHTSLA QEYEIAAHAM GFSDGEIDRM
TRTALEAAFV DEPTRERLLA ALHI