| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3317 |
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| Symbol | |
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| ID | 5324201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3512684 |
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| End bp | 3514468 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792269 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001328974 |
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| Protein GI | 150398507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.59573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TGGTGGACGC CGGCATTTCC GCCGGCACCG AGGGCAAGCT CATACGCGCT
CTCGATTGGA AGGGCGCCTT CTGGGTAGCA GCCGGCGTGC CGCCGCTTGT GCTCTTCTCC
ATCGGCGGCA TTGCCGGTAC GACCGGCAAA CTGGCCTTTG CGGTCTGGAT CATCTCGATG
ATCATGGGCT TCCTGCAATC CTTCACCTAT GCGGAAATCG CCGGAATGTT CGCCAACAAG
TCGGGCGGCG CCTCGATCTA TGGAGCGACC GCATGGCTGC GCTATTCGAA GTTCATCGCG
CCGCTTTCCG TCTGGTGCAA CTGGTTCGCG TGGTCGCCTG TGCTCTCGCT CGGTTGCGTC
ATTGCCGCCG GCTATATTCT CAACGCCCTC TTCCCCATTC CGGCAGCGGC TTCGCAAGCC
GTCCTCGACT GGATCGGCGC CCATGCCGCC TCCGTCACCG TCGATAGCCC CCGCGTCGCC
GAGTATATTG CCGCCCATGC CGGAACCGCG CCGGCAGACG CCGTCAAGGC GCTGCTCGGG
GCCGACGGGG TAGCGGCGCT GACCCCGGCG ATCCGCAACT GGTCGCTGGC CAGCTTCAGC
ATTCCCTTTC TTGCCACGGC GAACATCAAC GCCACCTTCG TGATCGGCGG CATTCTGATG
CTGATCATCT TCGCGATTCA GCATCGCGGC ATTGCCGGGA CCGCAAGCGT CCAGAAGTGG
CTGGCGATGA TCGTCCTTAT TCCCTTGCTG ATCATCGGCA TCTATCCGAT CGTCAGCGGT
CACATCGTTT CCTCCAACGT CACCGGCCTG GTGCCTCCGA CGGCCGCTTA CTCGGGCGAG
GACGGCGCCT GGAGCAATGG CGGCTGGACG CTCTTTCTCG GCGGCCTCTA CATCGCCGCC
TGGTCGACCT ACGGCTTCGA AACAGCCGTC TGCTATACGC GCGAACTGAA GAACCCCCGT
ACCGACACCT TCAAGGCCAT CTTCTATTCC GGCCTTGTCT GCTGTCTCTT CTTCTTCCTC
GTGCCCTTCG CTTTCCAGGG CGTACTCGGC CATGGCGGCA TGCTGGCCCC CGGCATCATC
GACGGCACGG GCGTGGCCGA GGCGCTCGGC GGCCTGATCG GCGCCGGCCG TATCGTCACA
CAGCTTCTCG TCGTCCTGAT GATTCTTGCG CTTTTCCTCG CGATCATGAC GGCTATGGCA
GGCTCTTCGC GCACGCTTTA TCAGGGCTCG AAGGATGGCT GGCTGCCGAA GTATCTCGAC
CATGTGAATG AGAACGGCGC GCCGACCCGG GCCATGTGGA CCGACTTCGC TTTCAATCTC
TTCCTGCTTG CCATCGCATC GGATGCCGGC GGCTATTTTT TCGTGCTCGC CGTCTCCAAT
GTCGGCTACA TCATCTTCAA CTTCCTGAAC CTCAACTCTG GCTGGATCCA CCGCATCGAC
TCCGGCCATA TCGAACGGCC CTGGCGGGCG CCGACCTGGC TGATCGGCCT GAACACCGTG
CTTGCCTTCG TGAACGCGCT CTTCCTCGGC GCCGGCGCCA AGGTCTGGGG TTATTCCAAT
GCGCTCTGGA TCGGCTTCGC CTTCGCCGCG CTCATCCTGC CGGTCTTCGC CTATCGGCAT
TATTTTCAAG ACCGGGGCAG ATTCCCGCCC GAAGCCATGG ATGATCTCGG CCTCGCCGGA
CAGGATCTCG GCGTTAGGAA AGCGGGCATG CTGCCTTATC TGGCCCTCGG CGCAGGCCTC
TCCATCGTGC TGTTCGCGAA CTGGTTCTTC CAGCTGCCGG CCTGA
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| Protein sequence | MTDMVDAGIS AGTEGKLIRA LDWKGAFWVA AGVPPLVLFS IGGIAGTTGK LAFAVWIISM
IMGFLQSFTY AEIAGMFANK SGGASIYGAT AWLRYSKFIA PLSVWCNWFA WSPVLSLGCV
IAAGYILNAL FPIPAAASQA VLDWIGAHAA SVTVDSPRVA EYIAAHAGTA PADAVKALLG
ADGVAALTPA IRNWSLASFS IPFLATANIN ATFVIGGILM LIIFAIQHRG IAGTASVQKW
LAMIVLIPLL IIGIYPIVSG HIVSSNVTGL VPPTAAYSGE DGAWSNGGWT LFLGGLYIAA
WSTYGFETAV CYTRELKNPR TDTFKAIFYS GLVCCLFFFL VPFAFQGVLG HGGMLAPGII
DGTGVAEALG GLIGAGRIVT QLLVVLMILA LFLAIMTAMA GSSRTLYQGS KDGWLPKYLD
HVNENGAPTR AMWTDFAFNL FLLAIASDAG GYFFVLAVSN VGYIIFNFLN LNSGWIHRID
SGHIERPWRA PTWLIGLNTV LAFVNALFLG AGAKVWGYSN ALWIGFAFAA LILPVFAYRH
YFQDRGRFPP EAMDDLGLAG QDLGVRKAGM LPYLALGAGL SIVLFANWFF QLPA
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