| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3316 |
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| Symbol | |
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| ID | 5324200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3510085 |
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| End bp | 3512454 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792268 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001328973 |
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| Protein GI | 150398506 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG3665] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC GCCATCCCGG AATGCTTGGA GGGAGGCCCG TTTCGGCGAG CATCATCCGC
TATCCGGGCA TTCCTGCGCT TCCAAAGGAC AGGGAACGGT ATCGATGCAA GGGTGGCGGC
TCGCTGGTCG TTCGCGTCGA AGCGGGAGAC CACGTGACGG TCACCGATAT CGAAGGTTGC
CAGGCATGCG AGCTTTCCTT CCTCGACGAA GACGGCCGCT TCCAGTCGGC AGGACTTGGC
ACCGCTTTCA CCAATGACGC GGAGGGACTG AAGACCATTC TGTCCCTCGA AGAGGAGAGC
TCGCTTCGCA CTCGAAACGC CCTCCGGCGT CGCGGCGCGG ATCTCTCCAC GGCCGGCGCT
CTGCGTGTCT TCGGGGAGCG GTCCACGCCG GGCAGCAAGG CGGAATTCAC GACCACGATG
AAGGGACTGC TGATCGTTGC CGCTCCCGGA AAGGCGATGG CGCCAGAGGC ACAGGACACG
GCAACGCCCA TCGAGACCAT GATCCGCCGC AGCAGGCCGA TCCGCGACTA TACCTCCGCC
CTGCCGGAAC CGCTGGCCGA TCCGATCCAC GACATCCGCA TCAAGGCCGC CACTGCGTCA
GCATATTTCG TACGGGCCGG AGAATTCATA CAAATCATCG ACGTATACGG CCGCCAGTGC
ACGGACTTCC AGGCCTTTGC CGCCCGCAAG GTCGACAAGG GCCTCGACCG GGCGCTCGAT
TCGACCGTCA CGCGTACCCT GCTGGGACGC AGCTACCCGG CGCCGGGCCT GCCGTCCAAG
GCTTTCGATC GCGATTTCGA GCCGCTTGTG GAGATCGTAC AGGACACGGT CGGCCGCCAT
GACGCCTTCG CCACCGCCTG CAATGCGCGG TACTACGACG ATATGGGCTA TCCCGGCCAC
GTCAATTGTA CGGACAATTT CAATGCGGCG CTTGCTCCTT ACGGAATTTC CGGCCGGAAG
GGCTGGGAAG CGCTCAATTA TTTCTACAAC ACCAGTATCG ATCACAACAA CCAGCTCTAT
CTCGATGAGC CCTGGTCTCG TCCGGGCGAC TATGTGCTGA TGCGAGCCGT GACGGACCTG
ATCTGCGTCT CGTCCTCCTG CCCAGACGAC ATCGATGCGG CAAACGGCTG GGATCCGACC
GACATTCACG TCCGGACCTT TTCCGGAAAC GAGCAATTCT CACGAGCGGT AGCCTATCGC
ATGACACCCG ATGCCGATCC CGAAATGACG CGCGAAACAG CCTTCCATCC CCGCTTCTCG
GCGCTCACGC GGGACTACGC CGAGTATCGC GGCTATTGGC TGCCGAACCG GTTTTCGTCG
GAAGGACCGA TCGAGGAATA CTGGGCCTGC CGCGAGAGAG CCGCAGTCAT CGACCTCTCG
CCGCTGCGGA AGTTCGAGGT CACGGGCCCG GATGCCGAGG AATTGCTGCA ATATTGCCTG
ACGCGCGACG TACGCAAGCT TTCCACGGGC CAGGTCGTCT ATTCCGCAAT GTGCTACGAG
CATGGCGGCA TGATCGACGA CGGAACCCTC TTCCGCCTCG GTGATAAGAA CTTCCGCTGG
ATCGGCGGCG ACGATTACAG CGGCATCTGG CTGCGAGAGC AGGCGGAGAA GAAGGGCTTC
AGGGCCTGGG TGCGCTCATC GACCGACCAG ATGCATAATA TTGCCGTTCA GGGGCCGAAG
AGCCGCGATA TCCTCAGGGA GATCATCTGG ACAGCACCCC GTCAGTCCAC GATCAGCGAG
CTCGAATGGT TCCGCTTTGC GGTCGGTCGC ATCGGGGGGT TCGAAGGCGC ACCTGTCGTC
GTCTCCCGCA CCGGGTATAC CGGCGAACTC GGCTACGAAA TATTCTGTCA TCCGAAAGAT
GCACTGACCG TATTCGACGC GGTCTGGCAG GCTGGAGAGC CGCATGGGAT GAAGCCGATG
GGGTTGGAAG CGCTCGACAT GGTTCGCATC GAGGCGGGCC TGATCTTCGC CCATTACGAC
TTCGACGATC AGACCGACCC GTTCGAGGCC GGTATCGGCT TCACGGTGCC GCTGAAATCA
AAGCCGGACG ATTTCATAGG CCGCGAAGCG CTGATGCGCC GCAAGGAAAG CCCACGCCAG
CTGATGGTCG GGCTCGACGT TCTGGCGAAC GAGGCGATCG GCCATGGCGA TTGCGTGCAT
GTCGGACGCG CGCAGATCGG CGTTGTCACC AGTGCAACCC GTTCGCCGGT CCTCGGCAAG
ACGATCGCAC TCGCCCGGAT CGACGTCACG CATGCGACGG TCGGTACGCA GGTCGAGATC
GGCAAACTCG ACGGCCAGCA AAAACGCCTG CCGGCGGCTG TCGTGCCGCT GTCGCATTAC
GATCCCCAGA AGAAGCGGCC GCGCTCGTAG
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| Protein sequence | MEDRHPGMLG GRPVSASIIR YPGIPALPKD RERYRCKGGG SLVVRVEAGD HVTVTDIEGC
QACELSFLDE DGRFQSAGLG TAFTNDAEGL KTILSLEEES SLRTRNALRR RGADLSTAGA
LRVFGERSTP GSKAEFTTTM KGLLIVAAPG KAMAPEAQDT ATPIETMIRR SRPIRDYTSA
LPEPLADPIH DIRIKAATAS AYFVRAGEFI QIIDVYGRQC TDFQAFAARK VDKGLDRALD
STVTRTLLGR SYPAPGLPSK AFDRDFEPLV EIVQDTVGRH DAFATACNAR YYDDMGYPGH
VNCTDNFNAA LAPYGISGRK GWEALNYFYN TSIDHNNQLY LDEPWSRPGD YVLMRAVTDL
ICVSSSCPDD IDAANGWDPT DIHVRTFSGN EQFSRAVAYR MTPDADPEMT RETAFHPRFS
ALTRDYAEYR GYWLPNRFSS EGPIEEYWAC RERAAVIDLS PLRKFEVTGP DAEELLQYCL
TRDVRKLSTG QVVYSAMCYE HGGMIDDGTL FRLGDKNFRW IGGDDYSGIW LREQAEKKGF
RAWVRSSTDQ MHNIAVQGPK SRDILREIIW TAPRQSTISE LEWFRFAVGR IGGFEGAPVV
VSRTGYTGEL GYEIFCHPKD ALTVFDAVWQ AGEPHGMKPM GLEALDMVRI EAGLIFAHYD
FDDQTDPFEA GIGFTVPLKS KPDDFIGREA LMRRKESPRQ LMVGLDVLAN EAIGHGDCVH
VGRAQIGVVT SATRSPVLGK TIALARIDVT HATVGTQVEI GKLDGQQKRL PAAVVPLSHY
DPQKKRPRS
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