Gene Smed_3291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3291 
Symbol 
ID5324175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3483737 
End bp3484642 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID640792243 
Productglutamine amidotransferase class-II 
Protein accessionYP_001328948 
Protein GI150398481 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0067] Glutamate synthase domain 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA TTGTTGGTTT GTTCTTGAAA GACAGCAGGC TCGAGCCGCA GCTGGGTCAG 
CTTCTTTCTG ACATGTTGAT CACCATGACG GACCGGGGGC CGGATTCGGC CGGGCTCGCC
ATTTACGGCT CGGCCACCGA CGGGAAAGCG AAGGTGACGA TCCAGTCGGC AAAGCCCGAT
ATCGATTTCT CGGATCTTGA ACGCGATCTT GCCGAAGCAG GTCTGCCGGC ACGCGTCGCC
GTCAAAAGCA CCCATGCCGT CGTGGCGGTT GCGGGGGCCA GACTTGCGGA TGTGCGTGCC
GTTCTCGCCG CCATTCGCCC TGACGTGCGC ATCATGGGTG CTGGCGACAG CGTTGAAATT
TATAAGGAAG TCGGCCTGCC GAAGGATGTC GTCGCCCGCT TCGACGTCCG CTCGATGAGC
GGTTCGCACG GCATCGGCCA CACCCGTATG GCTACGGAAT CGGCCGTGAC GACACTTGGT
GCTCACCCGT TCTCGACCGG ATCGGACCAG TGCCTTGTGC ATAACGGATC GTTGTCGAAC
CACAACAATC TGCGCCGGGA ATTGATCCGT GAAGGAATTG CCTTCGAGAC GCAGAACGAC
ACCGAGGTCG CTGCCGCCTA TCTCACGGCA GAAATGGCCA AGGGCAAGGA CCTCGGGCAG
GCCCTGACCG GTGCACTCGA CGACCTCGAT GGCTTCTTTA CCTTCGTCGT CGGCACCAAG
TCGGGCTTCG GCGTCGTGCG GGACCCGATC GCCTGCAAGC CGGCGGTCAT GGCTGAAACG
GACCGCTATG TCGCATTCGG CTCCGAATAC CGGGCACTCG TCAACCTGCC GGACATCGAG
AGCGCGCGCA TCTGGGAGCC GGAGCCTGCG ACCGTCTACT TCTGGGATCA TCAGAAGGCC
GCCTGA
 
Protein sequence
MCGIVGLFLK DSRLEPQLGQ LLSDMLITMT DRGPDSAGLA IYGSATDGKA KVTIQSAKPD 
IDFSDLERDL AEAGLPARVA VKSTHAVVAV AGARLADVRA VLAAIRPDVR IMGAGDSVEI
YKEVGLPKDV VARFDVRSMS GSHGIGHTRM ATESAVTTLG AHPFSTGSDQ CLVHNGSLSN
HNNLRRELIR EGIAFETQND TEVAAAYLTA EMAKGKDLGQ ALTGALDDLD GFFTFVVGTK
SGFGVVRDPI ACKPAVMAET DRYVAFGSEY RALVNLPDIE SARIWEPEPA TVYFWDHQKA
A