| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3196 |
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| Symbol | |
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| ID | 5324075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3368314 |
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| End bp | 3370221 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792144 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001328855 |
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| Protein GI | 150398388 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCC GCTATCGCGA AGTGTACGCC GCGTGGAAAG CTGATCCGCA GGGATTCTGG
GCAGATGCCG CATCGGCGAT CGACTGGATC AAGCAGCCGG AGCGCGTTTT CGACCCGGAG
GGCGGCACCT ATGGCCACTG GTTTCCGGAC GGCATGACCA ACACCTGTCA CAATTGCCTA
GACCGGCATG TCGAGGCTGG CCGTGGCGAG CAACCGGCCC TCATATATGA CAGTCCCGTC
ACCGGCGTGA CCGAGAAGAT CTCCTATGCG GACCTGCTAG CCGATGTGAA GGCAATGGCT
GCAATCTACC ACGAGCTCGG CGTAGTCAAA GGCGATCGCA TCATCATCTA CATGCCGATG
ATCCCGCAGG CCGCTATCGC CATGCTCGCG GCAGCGCGGA TCGGCGCGGT GCATTCCGTC
GTTTTCGGCG GTTTTGCCGC CAATGAGCTG GCCGTCCGCA TCGATGACTG CCAGGCGAAA
CTCGTCGTCT CCGCAAGCTG CGGGCTCGAG CCCGGGCGGA CCGTGGCCTA CAAGCCTCTG
CTCGACCAGG CGATTGAAAC GGCAACCCAC AAGCCCGCCC ATTGCCTGAT CTACCAGCGC
GGCATGCTCG ATGCCGCCAT GGTTCAAGAT CGCGACATCG ACTTCGCCGA GGCGCTTGCG
GAGGCCAAGG ATAAAGGCGA GGAGGCACCT TGCGCCTCCG TCGCCTCGAC GGATCCGCTC
TATGTGCTCT ATACTTCCGG AACGACCGGA CAGCCGAAAG GCGTTGTGCG TGACAATGGC
GGGCATATGG TCGCGCTCAG ATGGTCGATG GAGCATTTTT TCGGCGTGAA TGCCGGCGAG
GTGTTCTGGG CCGCTTCCGA TATCGGCTGG GTCGTCGGCC ACTCCTATAT CGTCTATGGT
CCGCTCCTCA ACGGATCCAC ATCGATCCTC TTCGAAGGAA AGCCGGTCGG CACACCCGAC
CCCGGAACCT ATTGGCGCGT CATTTCCGAA CACGGCGTCG CCGTCACGTT CACCGCGCCG
ACGGCACTGC GTGCGATCCG CAAGGAGGAT CCGGAAGCAA ATCACGTGCA GCGATACGAC
CTATCGAAAT TTCGGGCGCT CTACCTCGCG GGCGAGCGGG CCGACCCGGA CACGATCCGC
TGGGCGGAAC GGGCGCTGAA GGTCCCGGTC ATCGATCATT GGTGGCAGAC GGAAACAGGC
TGGCCCGTCG CCGGCAATCC GCTGGGTCTT GGCCTCCTGC CGGTGAAATA CGGTTCGCCG
GCGGTTCCCC TTCCGGGTTA TGACGTACAG GTCGTGGATG ACGCGGGCCA TCCGGTAGGA
TCCGGCACGC TCGGCAATGT CGTGATCAAG CTGCCGTTGC CGCCCGGCTG CCTGCCGACG
CTCTGGAATG CCGATCGCCG CTTTCATGCA GCCTATCTCG AAGAATATCC CGGCTTCTAC
AAGACGGCCG ATGCCGGCTA TGTCGACGAC GACGGCTACA TCTTCATCAT GGCGCGGACC
GACGACATCA TCAATGTGGC GGGACATCGG CTGTCGACGG GCGCCATGGA AGAGGTCTGC
GCCAGCCATC CGGATGTCGC GGAGTGTGCC GTGATCGGTA TTGCTGACTC CCTCAAAGGG
CAGGTTCCGG CAGGCTTCCT CGTCGTCAAC GCCAATGTTT CCCGTGAAAC AGCGGAAATA
GAGAAGGAGG TCATCGCTCT CGTGCGCGAG CGCATCGGGC CGGTAGCCGC CTTCAGGACC
GCGGTTTGCG TCAAGCGCCT CCCCAAGACG CGGTCCGGCA AGATCCTGCG CTCCACGATC
CAGAAGATCA TTGATCGCCA ACCCTGGAAA ATGCCGGCGA CGATCGACGA TCCAGCAATT
CTGGAAGAAA TAGCCGATGT GCTGCGGGCG AAGGGGATTG GTGTTTAA
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| Protein sequence | MASRYREVYA AWKADPQGFW ADAASAIDWI KQPERVFDPE GGTYGHWFPD GMTNTCHNCL
DRHVEAGRGE QPALIYDSPV TGVTEKISYA DLLADVKAMA AIYHELGVVK GDRIIIYMPM
IPQAAIAMLA AARIGAVHSV VFGGFAANEL AVRIDDCQAK LVVSASCGLE PGRTVAYKPL
LDQAIETATH KPAHCLIYQR GMLDAAMVQD RDIDFAEALA EAKDKGEEAP CASVASTDPL
YVLYTSGTTG QPKGVVRDNG GHMVALRWSM EHFFGVNAGE VFWAASDIGW VVGHSYIVYG
PLLNGSTSIL FEGKPVGTPD PGTYWRVISE HGVAVTFTAP TALRAIRKED PEANHVQRYD
LSKFRALYLA GERADPDTIR WAERALKVPV IDHWWQTETG WPVAGNPLGL GLLPVKYGSP
AVPLPGYDVQ VVDDAGHPVG SGTLGNVVIK LPLPPGCLPT LWNADRRFHA AYLEEYPGFY
KTADAGYVDD DGYIFIMART DDIINVAGHR LSTGAMEEVC ASHPDVAECA VIGIADSLKG
QVPAGFLVVN ANVSRETAEI EKEVIALVRE RIGPVAAFRT AVCVKRLPKT RSGKILRSTI
QKIIDRQPWK MPATIDDPAI LEEIADVLRA KGIGV
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