Gene Smed_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3130 
Symbol 
ID5324009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3279052 
End bp3280521 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content66% 
IMG OID640792080 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001328791 
Protein GI150398324 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG CCATTCTCGC CATCGACCAG GGCACCACGA ATTCAAAAGC CGTTCTCGTT 
TCGACGACCG GTGAGATCCT CTCGCGTGGC GCATCGCCGG TCGGCATCGA ACATCCGCAG
CCCGGCTGGG TGGAGCAGAA CCCGCTTCGC ATCTGGGAAT CGGTTCAGGA GGCGATTGCC
GCCTGCCTGC AGAAGGGACC CCGATCCGAC ATCCTCGGGA TCGCGATCTC CAACCAGCGC
GAGTCGGTCA CCGCCTGGGA CGCCGCAACG GGCAAGCCGC TCGGCCCGGT GGTCAGCTGG
CAATGCCGCC GCAGCGCGCC GGCCTGCGCC GAACTCAGCG CCGCAGGCCA TGCCGAGCGC
GTCCGGGCGC TCACGGGTCT CCCCATAGAC CCTATGTTCC CCGGTCCCAA AATGAAGTGG
CTGCTCGATC GCATTCCCCC GGGACATGAG GTCCGGCTGG GCACGATCGA CGCGTGGCTG
ATCCATTGCT TCACGGCTGG CGCGATCCAT GCCTGCGATG CCGGCAATGC CGCCCGCAGC
CAGCTTTACG ACCTCAACCG CCGGGCCTGG AGCGACGAGC TTTGCGACCT GTTCGGCGTA
CCCAAATCCG CCCTGCCGGA GGTGTGCGAC AGCGCCGCCC GCTTCGGCGT CACGAAGAAT
GTGCCGGGGC TGAAGGACGG AATCCCGATC GCCTCGGCGA TCGGCGACAG CCACGCCGCG
CTTTTCGGCC ACGGGGCCTT CAAACCCGGC GACGGCAAAG TGACCTTCGG CACCGGCTCT
TCTATCATGA CGACCCTACC CCGCTTCATC GCTCCCGAGC AGGGAATTAC GACGACGATC
GCCTGGTCGA TCGCCGGCCG GCCGACCTAT GCCTTCGAGG GCAACATTCT CGTTTCGGCC
GCGGCCCTTC CATGGATGGC CGAAATGCTC GGCCTTTCCC ATGTGGAGGA CCTGATCGAT
CTCGCCGCCA CCGCCGAGCC CCGCGGCCCG GGTTTCGTGC CGGCCTTCGT GGGTCTCGGC
GCCCCTTACT GGCACGCCGA TGCACGAGCG CTGTTTTCCG GCATAACCTT CAACACGACG
CGCGCCCAGA TGGCGCGTGC GGTCACGGAC TCAATGGCCT TCCAGGTCCA TGACGTCTTC
AAGGCGATGT CGGCACAATC GCCGACACCG CTCGGCCGAC TCTATGCGGA TGGCGGGCCG
AGCAAGAACA CTTTCCTGAT GCAATGCGTG GCCGATACCC TGAACCATGT CATCACTCAG
TGCGACGCGC CAGAGGCCTC GGCGCTCGGC GCAGCCTATC TGGCGGGTCT CTCGCTCGGC
GTTTGGCCCG ATCTCGCCGC TGTCGCTTCA CTGCCGCGCG CCGGCAAACC CGTGCTGCCG
CGCCCTTGCG ATGCCGCAGA TCGCCTCATG GTTTGGCAGG ACGCAATCTA CCGCTCGACC
GTTCCAGGTC CTTCAATTAT GAGTGAATAA
 
Protein sequence
MTTAILAIDQ GTTNSKAVLV STTGEILSRG ASPVGIEHPQ PGWVEQNPLR IWESVQEAIA 
ACLQKGPRSD ILGIAISNQR ESVTAWDAAT GKPLGPVVSW QCRRSAPACA ELSAAGHAER
VRALTGLPID PMFPGPKMKW LLDRIPPGHE VRLGTIDAWL IHCFTAGAIH ACDAGNAARS
QLYDLNRRAW SDELCDLFGV PKSALPEVCD SAARFGVTKN VPGLKDGIPI ASAIGDSHAA
LFGHGAFKPG DGKVTFGTGS SIMTTLPRFI APEQGITTTI AWSIAGRPTY AFEGNILVSA
AALPWMAEML GLSHVEDLID LAATAEPRGP GFVPAFVGLG APYWHADARA LFSGITFNTT
RAQMARAVTD SMAFQVHDVF KAMSAQSPTP LGRLYADGGP SKNTFLMQCV ADTLNHVITQ
CDAPEASALG AAYLAGLSLG VWPDLAAVAS LPRAGKPVLP RPCDAADRLM VWQDAIYRST
VPGPSIMSE