| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3077 |
|---|
| Symbol | |
|---|
| ID | 5323956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3225916 |
|---|
| End bp | 3226473 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640792027 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001328738 |
|---|
| Protein GI | 150398271 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA CGCTCCGCGA CGCCGTTGCC GCCGATCTCC CTGTTATCAC GGGGATTTAT
CGCGAGTCCG TCTTGAACGG GGTCGCAAGC TATGAGGAGA CACCGCCGAC CGAGGCCGAG
ATGGCGCTCC GCTTCTCGAC GATCACCGGG AGCGGTTACC CCTATGTCGT CGCGCTGGAT
GAGGCCGGCG CCGTTATCGG CTACGCCTAT GCCTCGGCAT TTCGCAACCG CAGCGCCTAT
CGATTCGTGG TGGAGGATTC GATCTATCTT TCGCCGGCAG CGCGCGGCAA GGGCACCGGC
AAAGCTTTGC TTTCCGAACT GATCGGGCGC TGCACCGCTC TCGGCTTCCG CCAGATGATA
GCGGTGATCG GTGGGGCCCA CCCCTTGTCG ATCGCCCTGC ACCGGGCGCT CGGCTTCGAG
CAGCAGGGTC TGATAAAGGC AACGGGCTTC AAGCATGGGC GCTGGCTCGA TACGGTCTTC
ATGCAGCGTC CGCTCGGCGA GGGCACGACA ACGACGCCCG CAGCGGGTGT CTATCCGGAC
ACGCTTTACA GGGGTTGA
|
|---|
| Protein sequence | MTATLRDAVA ADLPVITGIY RESVLNGVAS YEETPPTEAE MALRFSTITG SGYPYVVALD
EAGAVIGYAY ASAFRNRSAY RFVVEDSIYL SPAARGKGTG KALLSELIGR CTALGFRQMI
AVIGGAHPLS IALHRALGFE QQGLIKATGF KHGRWLDTVF MQRPLGEGTT TTPAAGVYPD
TLYRG
|
|---|
| |