Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3023 |
Symbol | |
ID | 5323901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3173886 |
End bp | 3174842 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791973 |
Product | hypothetical protein |
Protein accession | YP_001328685 |
Protein GI | 150398218 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.281163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAA ACGCCGTGCA ACGGCAAACT GTTCTTTCCC TTCGCGAAAC CATTGCGCGG ATCGAAGATC GCGGGCTGCA GGGATGCGCC CGGGCGGTGG CCAAGGCGGC CGATCCCGCC GGTTTTCGCC GGGGAAAGGA AGAGGCTTCC CGCCCCGAGG TTCTGCCACT GGGCGTCCCG AAGCTCGATG AGGTCCTGAA CGGCGGATTG CCGTTCGGGG GCATGATGGA GATTCGCAAT GCGGAAACCC GCGATGCGGG GGCCGCCGTC GGTTTCGTGG CGGCCCTTGC GGCGCTCTAT CAGCGGCAGA AAAAGGAGAG TGGCTGTCTG GCTCCGGTCC TTTGGATCAG CCAGACGCTT GCCGCCCGTG AGGCGGGTCA GCCATATGCG CCTGGCCTCA AGGCCTATGG GCTCGACGTC CAACGCTTCC TCTTCGTTTC GGCACGCACG GTCAAGGATG CGCTCTGGAT CGCCGAAACG GCTCTTTCGG TGCCGGTCTT CGCCGCGGTC GTTCTGGAAA TCCGCGGCAA TCCTGCCTCC CTGGCCCTGA GCGAGAGCCG GCGGCTGCAT GTGAGGGCCC GGGCGGGCGG CGTGCCTCTC CTCGTCTTCC GCCAGGCGGG CGAGGAGGAG GCGAGCAGCG CCTTTTTCCG TTTTCAGGTC AAGCCGGCGC CGGCCGGCGA ACGTCCTCTT CCCGACGGCT CGGTGCTTTG CGGCAGCATC GGCCATCCCG TCTTTCACCT CCTTGTCGAA AAAAGCAGGC TTCAAGCCTC CGACGACATC TTTCTTGAAT GGAACGCCCA TGACCGCCGC TTCTACGCAC TCGACGAGCG CTGGAACGCC GCTCTTCAGA CAAATGATGA GCCAACGGAT CCTGTCGATC CACTTTCCGC ATCTGCCGGC CGATCGCATC GCGCGCATTC GTTGGGGCGC CTCCTGGCTT TCCCGCGGGC GTCCTGA
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Protein sequence | MAGNAVQRQT VLSLRETIAR IEDRGLQGCA RAVAKAADPA GFRRGKEEAS RPEVLPLGVP KLDEVLNGGL PFGGMMEIRN AETRDAGAAV GFVAALAALY QRQKKESGCL APVLWISQTL AAREAGQPYA PGLKAYGLDV QRFLFVSART VKDALWIAET ALSVPVFAAV VLEIRGNPAS LALSESRRLH VRARAGGVPL LVFRQAGEEE ASSAFFRFQV KPAPAGERPL PDGSVLCGSI GHPVFHLLVE KSRLQASDDI FLEWNAHDRR FYALDERWNA ALQTNDEPTD PVDPLSASAG RSHRAHSLGR LLAFPRAS
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