Gene Smed_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3023 
Symbol 
ID5323901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3173886 
End bp3174842 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content65% 
IMG OID640791973 
Producthypothetical protein 
Protein accessionYP_001328685 
Protein GI150398218 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.281163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA ACGCCGTGCA ACGGCAAACT GTTCTTTCCC TTCGCGAAAC CATTGCGCGG 
ATCGAAGATC GCGGGCTGCA GGGATGCGCC CGGGCGGTGG CCAAGGCGGC CGATCCCGCC
GGTTTTCGCC GGGGAAAGGA AGAGGCTTCC CGCCCCGAGG TTCTGCCACT GGGCGTCCCG
AAGCTCGATG AGGTCCTGAA CGGCGGATTG CCGTTCGGGG GCATGATGGA GATTCGCAAT
GCGGAAACCC GCGATGCGGG GGCCGCCGTC GGTTTCGTGG CGGCCCTTGC GGCGCTCTAT
CAGCGGCAGA AAAAGGAGAG TGGCTGTCTG GCTCCGGTCC TTTGGATCAG CCAGACGCTT
GCCGCCCGTG AGGCGGGTCA GCCATATGCG CCTGGCCTCA AGGCCTATGG GCTCGACGTC
CAACGCTTCC TCTTCGTTTC GGCACGCACG GTCAAGGATG CGCTCTGGAT CGCCGAAACG
GCTCTTTCGG TGCCGGTCTT CGCCGCGGTC GTTCTGGAAA TCCGCGGCAA TCCTGCCTCC
CTGGCCCTGA GCGAGAGCCG GCGGCTGCAT GTGAGGGCCC GGGCGGGCGG CGTGCCTCTC
CTCGTCTTCC GCCAGGCGGG CGAGGAGGAG GCGAGCAGCG CCTTTTTCCG TTTTCAGGTC
AAGCCGGCGC CGGCCGGCGA ACGTCCTCTT CCCGACGGCT CGGTGCTTTG CGGCAGCATC
GGCCATCCCG TCTTTCACCT CCTTGTCGAA AAAAGCAGGC TTCAAGCCTC CGACGACATC
TTTCTTGAAT GGAACGCCCA TGACCGCCGC TTCTACGCAC TCGACGAGCG CTGGAACGCC
GCTCTTCAGA CAAATGATGA GCCAACGGAT CCTGTCGATC CACTTTCCGC ATCTGCCGGC
CGATCGCATC GCGCGCATTC GTTGGGGCGC CTCCTGGCTT TCCCGCGGGC GTCCTGA
 
Protein sequence
MAGNAVQRQT VLSLRETIAR IEDRGLQGCA RAVAKAADPA GFRRGKEEAS RPEVLPLGVP 
KLDEVLNGGL PFGGMMEIRN AETRDAGAAV GFVAALAALY QRQKKESGCL APVLWISQTL
AAREAGQPYA PGLKAYGLDV QRFLFVSART VKDALWIAET ALSVPVFAAV VLEIRGNPAS
LALSESRRLH VRARAGGVPL LVFRQAGEEE ASSAFFRFQV KPAPAGERPL PDGSVLCGSI
GHPVFHLLVE KSRLQASDDI FLEWNAHDRR FYALDERWNA ALQTNDEPTD PVDPLSASAG
RSHRAHSLGR LLAFPRAS