| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2980 |
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| Symbol | |
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| ID | 5323857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3128048 |
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| End bp | 3128719 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791931 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001328644 |
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| Protein GI | 150398177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.74053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTCA TCAATACCTT CTTCAATGTC AAAGTGCTGC TGGACAGCTT GCCACAGCTG
TTGTGGGGGC TCGCCGTGAC GCTTCAGATC GGCATCACGA GTATATTGTG CGGGCTCGCC
GGCGGTCTGT TTCTGGCAGT CGCCCGTCTT TACTCGCCGC CGTTCTGCCA GTTCCTGATC
CGGACCTATG TCGATGTTTT TCGATCGATC CCGCTGCTGG TCCTTCTCAT CGTCGTCTAT
TATGCGCTTC CTTTCGTGGG CATCAGGCTC TCGCCGTTTC TTTCCGCGGT GACCTCGCTC
AGCCTCGTCT CGGCCGCCTA TACGGCGGAG ATCTTCCGCG CCGGCATCGA GGCGATCCCG
CACGGCCAGT TCGAGGCTTC TGCGGCGCTT GGCCTTTCCA ACAGACACAC CATGGTCGAC
GTCATCCTTC CTCAGGCGGT CCGCATCGTC ATTCCACCGC TCACCAACAA TTGCATCAAT
GTCCTCAAGG ACACTGCACT TGCCTCCGTC GTCGCCATGC CGGACCTGCT GAAGCAGGCG
ACCCAGGCAC AGGCACTTGC CGCCAACCCG ACACCGCTGA TCGGAGCCGC CATCATCTAC
GTGATGCTGC TCTGGCCGAT GGTGATCGTC GTTGGCAGGC TCGAGACGAT TTTCAGCCGG
GGGAGACGAT GA
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| Protein sequence | MNLINTFFNV KVLLDSLPQL LWGLAVTLQI GITSILCGLA GGLFLAVARL YSPPFCQFLI
RTYVDVFRSI PLLVLLIVVY YALPFVGIRL SPFLSAVTSL SLVSAAYTAE IFRAGIEAIP
HGQFEASAAL GLSNRHTMVD VILPQAVRIV IPPLTNNCIN VLKDTALASV VAMPDLLKQA
TQAQALAANP TPLIGAAIIY VMLLWPMVIV VGRLETIFSR GRR
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