Gene Smed_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2953 
Symbol 
ID5323830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3102488 
End bp3103129 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID640791904 
Producthypothetical protein 
Protein accessionYP_001328617 
Protein GI150398150 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAGG CACTGATCGT CTGGGGTGGC TGGAGCGGGC ATGAGCCGCA GGAATGCGCC 
CATATCATCC GCGACATGCT GCAGGAGGAC GGATTCAAGG TCTATCTTGA ACATACGACG
GAAGCCTTCG CTGACCCGTC GATTCACGAC CTGTCACTGA TCGTTCCCAT AATGACCATG
TCGAAGATCG AAAAGGAAGA AGTGAAGAAC CTCGCTGCAG CCGTCGAGGG CGGCGTCGGC
ATCGCCGGCT ATCACGGAGG CGCGGGCGAT GCTTTCCGCG AGAGCGTCGA ATATCAGTTC
ATCATTGGCG GCCAGTGGGT GGCCCATCCC GGCAACGTCA TCGATTATCG CGTGAACGTC
ACACGGCCGG ACGACCCATT GATGAAGGGC ATCTCCGATT TCCCCTACAC CTCGGAGCAA
TATTACATGC ATGTCGACCC GTCCAACGAG GTCCTGGCCA CCACGACCTT CTCCGGCGCA
CATGCGTCCT GGATCGAAGG CGTGGTGATG CCGGTGGTCT GGAAGCGCAA GCATGGGAAA
GGCCGGGTCT TCTATTCCTC GCTCGGCCAC GTGGCCAAGG AGTTCGAGGT ACCGGAAATG
CGCACGATCT TCCGCCGCGG CGCGAACTGG GCGGCGCGCT GA
 
Protein sequence
MREALIVWGG WSGHEPQECA HIIRDMLQED GFKVYLEHTT EAFADPSIHD LSLIVPIMTM 
SKIEKEEVKN LAAAVEGGVG IAGYHGGAGD AFRESVEYQF IIGGQWVAHP GNVIDYRVNV
TRPDDPLMKG ISDFPYTSEQ YYMHVDPSNE VLATTTFSGA HASWIEGVVM PVVWKRKHGK
GRVFYSSLGH VAKEFEVPEM RTIFRRGANW AAR