Gene Smed_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2928 
Symbol 
ID5323805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3073712 
End bp3074365 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID640791879 
Productputative translaldolase 
Protein accessionYP_001328592 
Protein GI150398125 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TCGTTGATAC CGCCGATGTG AAGGACATCC GGGAGCTGAA CGACCTCGGC 
CTGCTCGACG GCGTCACCAC CAATCCGTCA TTGATCCTGA AGGCCGGCCG CGACATCGTC
GAGGTCACCA AGGAAATCTG CTCGATCGTC GAGGGACCGG TTTCCGCCGA GGTCACCGCT
ACCGAATACA GTGCGATGAT GAAGGAAGCG GCCGCACTTT CGAAGATCGC CGACAACATT
TGCATCAAGC TGCCGCTGAC GCTCGACGGC CTCAAGGCCT GCAAGGCGCT GACCTCGGAC
GGTCACCAGA CCAACGTGAC GCTTTGCTTC TCGGCCAACC AGGCCCTGCT CGCCGCCAAG
GCCGGTGCGA CATTCGTTTC GCCCTTCATC GGCCGCCTCG ACGACATCGC CGTCGACGGC
ATGGATCTGA TCCGCGAGAT CCGCCACATC TACGACAATT ACGGCTACGA GACCGAGATC
CTCGCCGCCT CGGTGCGCAC GGTCAACCAC GTCAAGGAAG CCGCGCTCAT CGGCGCCGAC
GTCGTCACCG CGCCGCCGGC GACGCTGAAG GCGCTGGTCA AGCACCCGCT GACCGACAAG
GGTCTCGAAA CGTTCCTCGC CGACTGGGCC AAGACAGGCC AGAAGATCGC CTGA
 
Protein sequence
MKFFVDTADV KDIRELNDLG LLDGVTTNPS LILKAGRDIV EVTKEICSIV EGPVSAEVTA 
TEYSAMMKEA AALSKIADNI CIKLPLTLDG LKACKALTSD GHQTNVTLCF SANQALLAAK
AGATFVSPFI GRLDDIAVDG MDLIREIRHI YDNYGYETEI LAASVRTVNH VKEAALIGAD
VVTAPPATLK ALVKHPLTDK GLETFLADWA KTGQKIA