Gene Smed_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2919 
Symbol 
ID5323796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3063580 
End bp3064044 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID640791870 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001328583 
Protein GI150398116 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.608239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA ATTCGCCGAC GAAAGCCGAC GATATGCAGG TAACCGACAA AGACCGCGAA 
CTCCTCGCCA TCCTGAGCGA GAACGCTCGC ATGTCCACGG CGACGATCGC CCGGCGCCTC
GGCCTGTCGC GCACGACCGT ACAGGCCCGA ATCGAACGGC TGGAGCGTGA GGGGGTGATC
GCGGGCTACG GCGTGCGGCT CTCGGAAAGC TACGAGAAGG GTCTCGTGCG AGCGCATGTC
CTGATCACCA TCGCGCCCCG GGCGCTGAGC CGGGTCACGC CGGAACTTGC CGCCATTGGC
GAAATCCGCA TGCTGCATTC GGTCAGCGGC AGTTTCGATC TGATCGCGGT CGTCGCGGCT
TCCTCGATCA GCGAACTGGA TCTGCTGATC GACCGCATCG GCGAGATCGA GGGTGTCGAA
AAGACCCTGT CGTCGATCAT TCTTTCGACC CGCATCGACC GTTGA
 
Protein sequence
MFGNSPTKAD DMQVTDKDRE LLAILSENAR MSTATIARRL GLSRTTVQAR IERLEREGVI 
AGYGVRLSES YEKGLVRAHV LITIAPRALS RVTPELAAIG EIRMLHSVSG SFDLIAVVAA
SSISELDLLI DRIGEIEGVE KTLSSIILST RIDR