Gene Smed_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2917 
Symbol 
ID5323794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3061738 
End bp3062595 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID640791868 
ProductABC-3 protein 
Protein accessionYP_001328581 
Protein GI150398114 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCAT CGCTCGACAT GCTCCTTGCG GTCTTCGAGT TCGAGTTCAT GCGCAACGCG 
CTGCTGATCT CGGTTCTGGT CGCGATCCCC ACGGCGATGC TCTCATGCTT CCTGGTGCTC
AAGGGCTGGT CGCTGATGGG CGATGCGATA TCGCATGCGG TCTTCCCCGG CATCGTTATC
TCCTACATCG CCGGCCTGCC GCTCGCCGTC GGTGCCTTTA CCGCAGGCAT GTGCTGCGCG
CTTCTGACCG GCTATCTGAA GGAAAACAGC CGCATCAAGC AGGACACGGT GATGGGCGTC
GTCTTTTCCG GGATGTTCGG TCTCGGCCTG GTGCTCTACA CCAAGATTCA GAGCGACGTG
CATCTCGACC ACATCCTCTT CGGCGACATG CTCGGCATCG GCTGGGGCGA CATATTCGAA
ACCGGCCTCA TGGCGCTTCT GGCCGGCGGC ATCCTCGGCC TGAAATGGCG CGATCTCCTG
CTGCACGCCT TCGATCCGGC GCATGCCCGC GCCATCGGAC TCAAGGTCGG TTGGCTGCAC
TACGGCCTGC TCGCGATCCT GTCGCTGACG ATCGTTGGCG CGCTGAAGGC GGTCGGCCTT
ATCCTGGCGA TAGCCATGCT GATCGCCCCC GGCGCTATCG CCTTTCTCGT CACCCGGACA
TTCGGCGCGA TGCTTGCGGT TGCCGTAATG GTCGCCGTCG CCGCTTCTTT TTGCGGCGTC
TACCTGTCCT TCTTCATCGA CAGTGCTCCG GCACCCACCA TTGTCCTTCT GATGACGGCT
ATATTCCTTC TCGCCTTCGC CTATTCCAGC TGGAGGACGG CCCGCGCCGA AGCCGAGCGG
ACAGGCGTGC TGGAATGA
 
Protein sequence
MMPSLDMLLA VFEFEFMRNA LLISVLVAIP TAMLSCFLVL KGWSLMGDAI SHAVFPGIVI 
SYIAGLPLAV GAFTAGMCCA LLTGYLKENS RIKQDTVMGV VFSGMFGLGL VLYTKIQSDV
HLDHILFGDM LGIGWGDIFE TGLMALLAGG ILGLKWRDLL LHAFDPAHAR AIGLKVGWLH
YGLLAILSLT IVGALKAVGL ILAIAMLIAP GAIAFLVTRT FGAMLAVAVM VAVAASFCGV
YLSFFIDSAP APTIVLLMTA IFLLAFAYSS WRTARAEAER TGVLE