Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2917 |
Symbol | |
ID | 5323794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3061738 |
End bp | 3062595 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791868 |
Product | ABC-3 protein |
Protein accession | YP_001328581 |
Protein GI | 150398114 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCAT CGCTCGACAT GCTCCTTGCG GTCTTCGAGT TCGAGTTCAT GCGCAACGCG CTGCTGATCT CGGTTCTGGT CGCGATCCCC ACGGCGATGC TCTCATGCTT CCTGGTGCTC AAGGGCTGGT CGCTGATGGG CGATGCGATA TCGCATGCGG TCTTCCCCGG CATCGTTATC TCCTACATCG CCGGCCTGCC GCTCGCCGTC GGTGCCTTTA CCGCAGGCAT GTGCTGCGCG CTTCTGACCG GCTATCTGAA GGAAAACAGC CGCATCAAGC AGGACACGGT GATGGGCGTC GTCTTTTCCG GGATGTTCGG TCTCGGCCTG GTGCTCTACA CCAAGATTCA GAGCGACGTG CATCTCGACC ACATCCTCTT CGGCGACATG CTCGGCATCG GCTGGGGCGA CATATTCGAA ACCGGCCTCA TGGCGCTTCT GGCCGGCGGC ATCCTCGGCC TGAAATGGCG CGATCTCCTG CTGCACGCCT TCGATCCGGC GCATGCCCGC GCCATCGGAC TCAAGGTCGG TTGGCTGCAC TACGGCCTGC TCGCGATCCT GTCGCTGACG ATCGTTGGCG CGCTGAAGGC GGTCGGCCTT ATCCTGGCGA TAGCCATGCT GATCGCCCCC GGCGCTATCG CCTTTCTCGT CACCCGGACA TTCGGCGCGA TGCTTGCGGT TGCCGTAATG GTCGCCGTCG CCGCTTCTTT TTGCGGCGTC TACCTGTCCT TCTTCATCGA CAGTGCTCCG GCACCCACCA TTGTCCTTCT GATGACGGCT ATATTCCTTC TCGCCTTCGC CTATTCCAGC TGGAGGACGG CCCGCGCCGA AGCCGAGCGG ACAGGCGTGC TGGAATGA
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Protein sequence | MMPSLDMLLA VFEFEFMRNA LLISVLVAIP TAMLSCFLVL KGWSLMGDAI SHAVFPGIVI SYIAGLPLAV GAFTAGMCCA LLTGYLKENS RIKQDTVMGV VFSGMFGLGL VLYTKIQSDV HLDHILFGDM LGIGWGDIFE TGLMALLAGG ILGLKWRDLL LHAFDPAHAR AIGLKVGWLH YGLLAILSLT IVGALKAVGL ILAIAMLIAP GAIAFLVTRT FGAMLAVAVM VAVAASFCGV YLSFFIDSAP APTIVLLMTA IFLLAFAYSS WRTARAEAER TGVLE
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