Gene Smed_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2908 
Symbol 
ID5323785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3051835 
End bp3052254 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID640791860 
Producthypothetical protein 
Protein accessionYP_001328573 
Protein GI150398106 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.47453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA TTGCCGCTCG CAACAACCGC TGGCCCGTCG CACTTGCCGC CGTACTCATC 
GTCTACCTTG GCGCCGCGGG CCTGCTTTTC TCGCTTCTGC CGGTGAAGGA CGGCGAGCGC
GACTGGTTCG CGCCGCTGGT CCCGGGAGGC TGGATGGCCT GGTCTTTCCC GACCGCCATG
TTCTTTCTGA CGATCTTCGC GCTCCTGTCG CTGATGGCCG TCTGGGAATA TGCCCGGCCC
GGCGGCAATC CCAGGGTCGG CATCCTGCGC TTCGAGACGA CACGCGGCGA CCGGCTCTTC
GTATCGCTTC TCGGAAGCGC ATTCATTCAC CTCGCCTGGC TGGGGCTGGT CGGCGCAAAT
CTCTGGTGGG CCGTCGCCCT CTCGGTGATC TATGCGGTCG GCGTCTTCCG CTACGTCTGA
 
Protein sequence
MAAIAARNNR WPVALAAVLI VYLGAAGLLF SLLPVKDGER DWFAPLVPGG WMAWSFPTAM 
FFLTIFALLS LMAVWEYARP GGNPRVGILR FETTRGDRLF VSLLGSAFIH LAWLGLVGAN
LWWAVALSVI YAVGVFRYV