Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2904 |
Symbol | |
ID | 5323781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3047945 |
End bp | 3049015 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791856 |
Product | ABC transporter related |
Protein accession | YP_001328569 |
Protein GI | 150398102 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.528485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAA TGAAGAACAT ATCCAAGGTC GTGGGGGGCG AGATGCACAT CCACCCGACC GACCTTGTGC TGGAGAGGGG GTCGCTGAAC GTGCTGCTCG GCCCGACGCT CTCCGGCAAG ACGTCGCTGA TGCGGCTGAT GGCCGGTCTC GACAAGCCAG CCTCCGGTTC GATCCATCTC GACAATGCGG ACGTTACCGG CGTTCCGGTT CAGAAGCGCT CGGTTGCCAT GGTCTACCAG CAGTTCATCA ACTATCCCGC GATGACGGTA TACGAGAACA TCGCCTCGCC TATGCGGATC AAGGGCGCCG ACGCCGCCAC CATCGACCGC GAAGTGCGCA AGGCGGCGGA ACTTCTGAAG CTTACGCCAT ATCTCGACCG CACGCCTCTC AACCTGTCCG GCGGCCAGCA GCAGCGCACG GCGCTTGCGC GCGCCATCGT CAAGAACGCC GATCTGGTGC TGCTCGACGA ACCGCTTGCG AACCTCGACT ACAAGCTGCG GGAGGAATTG CGCGAAGAGC TGCCGAAGAT TTTCTCCGCA TCAGGCGCGA TCTTCGTCTA TGCGACGACC GAGCCTTCCG AAGCGCTTCT CCTCGGCGGC AACACCGCCA CGATGAGCGA GGGAAGGATC ACCCAGTTCG GCCGCACAAT CGACGTCTAT CGCCAACCTG TCGATATCGT TACGGCACGT ACATTTGCCG ATCCGCCGCT CAATACCATC GACCTCCTGA AGAGCGGGTC GCATTTCGCG CTCGAAGGCA AGCCCGTGCT TCCCGTTCCC GTGCATCTCG GCGCCGTCGC CGACGGCCCC TGTACCGTCG CTTTCCAGCC ACACCACCTT TCTTTCGACC CGCCGAACGG CAGCGACCAA CCACTTGCCG TCAAGACGGC GATCTCGGAA ATCACCGGGT CCGAGAGTTT CATTCACGTC GCGTTCGCGG GCGCCCGCTG GGTCATGCTC GCGCCCGGCA TTCACGAGAT CGAACCGGAC GCAACCCTCA GAGTCTTCGT CGACACGCGC CACCTTATGG CCTTCGGGCC GGACGGCAGG GCGGTCGGCG GAAGGGCCTG A
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Protein sequence | MLEMKNISKV VGGEMHIHPT DLVLERGSLN VLLGPTLSGK TSLMRLMAGL DKPASGSIHL DNADVTGVPV QKRSVAMVYQ QFINYPAMTV YENIASPMRI KGADAATIDR EVRKAAELLK LTPYLDRTPL NLSGGQQQRT ALARAIVKNA DLVLLDEPLA NLDYKLREEL REELPKIFSA SGAIFVYATT EPSEALLLGG NTATMSEGRI TQFGRTIDVY RQPVDIVTAR TFADPPLNTI DLLKSGSHFA LEGKPVLPVP VHLGAVADGP CTVAFQPHHL SFDPPNGSDQ PLAVKTAISE ITGSESFIHV AFAGARWVML APGIHEIEPD ATLRVFVDTR HLMAFGPDGR AVGGRA
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