| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2857 |
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| Symbol | |
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| ID | 5323727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2983926 |
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| End bp | 2985554 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791802 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328522 |
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| Protein GI | 150398055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.791512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.700488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTCA TCAACAGGCG CGGCGCGCTG GGGCTCATCG GCGCAACTGC GGGCAGCATG
ATCCTGCCGC GCTTCGCCGT GGGTCAGGGC ACGCGCCCAT CCGTCACCAT CGCCGTGCAG
AAGATCACCA TCAACAACAC GCTCGACGTC TGGAACGAGC AGTCGAATGT CGGCGAGCGT
GTGTTCTTCC CCAACCTCTG GGAAGGCCTG ATCCTGCGCA ACTGGATGGG CGATCAGGGT
CCGGTTCCCG GCCTTGCGAC GGAATGGAAG CGCATTGACG ACAAAACGCT CGAGCTGAAG
CTGCGCCAGG GCGTAAAGTT CCATAATGGC GACGAACTCA CGGCCGACGA CGTCGTCTTC
AGCTTCTCGG CGCAGCGCGT GTTCGGGGAC ACCCAGCCTG CCGGCGGCAA GACGGTCTTC
GAGGATGAGC ACAAGCCGGC GACTGCGAAG GAACTGCCTG CGGTCGTGCC GGGTACCGGT
CGCCGCCTGT GGCCGGCGCT GGCCGGTGTC GAGGCAGTCG ACAAGTATAC CGTGCGTTTC
CACAACGCGA CGCCCGACGT CACCATCGAG GGCCGCCTTT ATGCATTCGG CAGCCAGATC
GCAAATCGTC GCGCCTGGGA TGAGGCGCCG ACCTACATGG ATTGGGCACG CAAGCCGATC
ACCACCGGGC CCTACAGGGT CGGCGAACAT AAGCCGGACG TGTCCCTGAC GCTGGTTGCC
TTCGACGACT ATTGGGGAGG CCGCCCGCCA CTCGAGCAAA TCCGTTTCGT TGAGGTTCCG
GAGGTCTCGT CTCGCGTGAA CGGGCTCCTC TCCGGCGAAT ATGATTTCGC CTGCGACCTG
CCGCCGGACC AGATCGCTGC CGTTCAGGCC GCACCGGGCT ACGAGGTTCA GGGCTCGACG
ATCCACAACC ACCGCATCTC GGTCTTCAAT GTCCAGAACC CGACCCTTCA GGATCCGCTC
GTCCGCCGCG CCATGACCCA TTCGGTCGAT CGCCAGGCGA TCGTCGATGC GCTCTGGGCC
GGACAGACGA CCGTCCCCGC TGGCCTGCAA TTTCCGTTCT ACGGGGATAT GTTCGTCGAA
GGCTGGGCGG TCCCTGAATA CGATCCGCAA CTGGCCAAGG ACCTCTTGAA GCAGGCCAAT
TACAAAGGGG ATGCGATCCC GTTCCGCCTT CTCAACAACT ACTATACGAA CCAGACCGCA
AACGGCCAGA TCATGGTCGA GATGTGGAAG CAGGTCGGGC TGAACGTCGA GATTGAAATG
AAGGAGAACT GGGGCCAGAT CCACGACCCG TCGGGCGTCA AGGGCGTGCG CGACTGGTCA
GCCGGTGCAG CCTTCAGCGA CCCCGTCTCC TCGATCGTTG CCCAGTTCGG ACCCAATGGC
GAGGTCCAGC AGAAGAAGGA CTGGTCGAAC GCCGAGGCCA ACCAGATGTC CCAGATCCTC
GAAACGGAAA CCGATCAGGC AAAGCGCAAG AAGGCATTTG CCCGCATGCT CGAAATCTGC
GAGCGCGAAG ACCCGGTCTA TCAGGTGCTT CATCAGAATG CGGTCTTCAC CGGAATGAAA
TCCTCTTTGA AGTGGAAGGC GGCACCCGCC TTCGCCATGG ATTTCCGCGC CGCCAACTGG
TCCAGCTGA
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| Protein sequence | MLLINRRGAL GLIGATAGSM ILPRFAVGQG TRPSVTIAVQ KITINNTLDV WNEQSNVGER
VFFPNLWEGL ILRNWMGDQG PVPGLATEWK RIDDKTLELK LRQGVKFHNG DELTADDVVF
SFSAQRVFGD TQPAGGKTVF EDEHKPATAK ELPAVVPGTG RRLWPALAGV EAVDKYTVRF
HNATPDVTIE GRLYAFGSQI ANRRAWDEAP TYMDWARKPI TTGPYRVGEH KPDVSLTLVA
FDDYWGGRPP LEQIRFVEVP EVSSRVNGLL SGEYDFACDL PPDQIAAVQA APGYEVQGST
IHNHRISVFN VQNPTLQDPL VRRAMTHSVD RQAIVDALWA GQTTVPAGLQ FPFYGDMFVE
GWAVPEYDPQ LAKDLLKQAN YKGDAIPFRL LNNYYTNQTA NGQIMVEMWK QVGLNVEIEM
KENWGQIHDP SGVKGVRDWS AGAAFSDPVS SIVAQFGPNG EVQQKKDWSN AEANQMSQIL
ETETDQAKRK KAFARMLEIC EREDPVYQVL HQNAVFTGMK SSLKWKAAPA FAMDFRAANW
SS
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