Gene Smed_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2802 
Symbol 
ID5323672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2924595 
End bp2925548 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content63% 
IMG OID640791747 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001328467 
Protein GI150398000 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.696873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.253524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG TTATCTTCGA TACGGATCCG GGCGTCGACG ACGCGATGGC CCTTCTCTTT 
CTGCACCGTC ACCCGGCAAT CGACCTCGTC GGCATCACCA CCGTCTTCGG CAATGCGTCG
ATCGAAACGA CGACACGCAA CGCGCTGTTC CTGAAGCAGG CATGGAATAT CCCCGCGCCG
GTCGCCAAGG GGAGCGGCGA GACGCTTGAT CCCGACCGGC CGCATGTCGG ATGGCCGACA
GGCATTCACG GTGACGACGG ACTCGGCAAT ATCGGCGTGC CGGCGGAAAT AGACCTGCCG
CTCGATCCGC GATGCGCCCA TCGCTTCATC ATCGACACCG TACGCGCCAA CCCGGGCGAC
GTGACGCTCG TCGCCGTCGG GCGGATGACG AACCTGGCGC GCGCGCTGCG CGCGGACCCG
GAGATCGCCA GGCTCGTCAG GTCGGTCGTG ATCATGGGCG GTGCTTTCGA TGTCACGGGC
AACATCACTC CTGCCGCCGA AGCCAATATC CATGGCGACC CGGAAGCGGC CGATGCAGTG
ATGACGGCCC CGTGGCCGGT TGCCGTCATC GGTCTGGACG TGACGACGAA GACGGTGATG
AGCCGCGCAA TGCTCTCCGA CATCGCCGAG CGTGGCGGCA GGCCTGCGAG ACTTCTCTCC
GATATCTCGC AGTTCTACAT CGACTTCTAT GAGCATCACG TGGATGACGG CATGATCGTC
CATGACAGCT GCGCCTGTGT CTATGTCGTC GCGCCCGAGC TCTTTCAGAC CCGCGGCGGC
GCGATCCGGG TCATTTGCGG CGGCATAGCC GACGGCCAGA CCCTTCAAAA ACCGGATGGA
CGACTTTTTC CGCCGAACGC CTGGGACGAC TTCCCAAGCC AGCAGACCTG CGTCGGCATC
GATGCCGATG CAGTGTTGAA GCTCATCGGC GACACGCTTG CGAACGGCAG CTGA
 
Protein sequence
MHKVIFDTDP GVDDAMALLF LHRHPAIDLV GITTVFGNAS IETTTRNALF LKQAWNIPAP 
VAKGSGETLD PDRPHVGWPT GIHGDDGLGN IGVPAEIDLP LDPRCAHRFI IDTVRANPGD
VTLVAVGRMT NLARALRADP EIARLVRSVV IMGGAFDVTG NITPAAEANI HGDPEAADAV
MTAPWPVAVI GLDVTTKTVM SRAMLSDIAE RGGRPARLLS DISQFYIDFY EHHVDDGMIV
HDSCACVYVV APELFQTRGG AIRVICGGIA DGQTLQKPDG RLFPPNAWDD FPSQQTCVGI
DADAVLKLIG DTLANGS