| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2774 |
|---|
| Symbol | |
|---|
| ID | 5323644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2894081 |
|---|
| End bp | 2894725 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640791719 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001328439 |
|---|
| Protein GI | 150397972 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3683] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC GACGCCTCGT CATGGCCGGC CTCGCCACCC TCCTCGCGCC GATGCTCGCC
CGCGCCCACC CGCATATTTT CGCGGAGGCT CGGCTGGAGA TCGTCTCCGA CGACAAGGGC
GAGATCGGGG AACTGAGGAA TGTCTGGCGC TTCGACGAGC TGTTTTCGGC CAGTGTCGTT
CTCGACTTCG ACAAGAACTC GAACGCCACG CTCGACCCGG ATGAATTGAA GGAAGTCGGC
CAGACGGTCC TCGATTCGCT CGCTGAGTAC AACTATTACA CGTCGATCTC CGACAATGGC
AAATCGGTGA AGGTCAGCAA ACCGGACAGC ATCACGGTCG ATTACAAGGA CAACCAGCTC
CTGATGATCT TCGCAGTGAA GCCGGCCGAG ACCATGCCTC TCAAAGGCAA GCTCTCCTTC
GGCGTCTATG ACCCAACCAT GTATACCGCT ATGGATTTCC CGACGGACGA AGACCTCTCC
GTCGTCGGCG ACACGATCGA AGCGTGCGAT CATCAGGTCG TGCGGCCCGA TCCTGACGAG
GTGCTGGCGG AAAACAAGGA TACGTTGACC GACGCCTTCT GGAGCGACCC GACCGGCACG
GACATGTCGA AGCTCTTTGC AACCAGGATC GAGATTACAT GCTGA
|
|---|
| Protein sequence | MNTRRLVMAG LATLLAPMLA RAHPHIFAEA RLEIVSDDKG EIGELRNVWR FDELFSASVV
LDFDKNSNAT LDPDELKEVG QTVLDSLAEY NYYTSISDNG KSVKVSKPDS ITVDYKDNQL
LMIFAVKPAE TMPLKGKLSF GVYDPTMYTA MDFPTDEDLS VVGDTIEACD HQVVRPDPDE
VLAENKDTLT DAFWSDPTGT DMSKLFATRI EITC
|
|---|
| |